Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.82□□□□□ -0.52
CX3CL1P78423 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC11.82□□□□□ -0.52
CX3CL1P78423 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CX3CL1P78423 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.82□□□□□ -0.52
CX3CL1P78423 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 GZMB-202ENST00000382540 816 ntTSL 5 BASIC11.82□□□□□ -0.52
CX3CL1P78423 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 ARSEP1-201ENST00000420443 635 ntBASIC11.82□□□□□ -0.52
CX3CL1P78423 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 AC234783.1-201ENST00000441761 496 ntBASIC11.82□□□□□ -0.52
CX3CL1P78423 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CX3CL1P78423 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.82□□□□□ -0.52
CX3CL1P78423 AL391280.1-201ENST00000506969 1062 ntBASIC11.82□□□□□ -0.52
CX3CL1P78423 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11.82□□□□□ -0.52
CX3CL1P78423 AC131206.1-201ENST00000538078 1211 ntBASIC11.82□□□□□ -0.52
CX3CL1P78423 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC11.82□□□□□ -0.52
CX3CL1P78423 RAB43P1-201ENST00000561790 589 ntBASIC11.82□□□□□ -0.52
CX3CL1P78423 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC11.82□□□□□ -0.52
CX3CL1P78423 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC11.82□□□□□ -0.52
CX3CL1P78423 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC11.82□□□□□ -0.52
CX3CL1P78423 OR10B1P-201ENST00000601666 907 ntBASIC11.82□□□□□ -0.52
CX3CL1P78423 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.82□□□□□ -0.52
CX3CL1P78423 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.82□□□□□ -0.52
CX3CL1P78423 AP000593.2-201ENST00000542775 1433 ntBASIC11.82□□□□□ -0.52
CX3CL1P78423 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.82□□□□□ -0.52
CX3CL1P78423 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC11.82□□□□□ -0.52
CX3CL1P78423 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.82□□□□□ -0.52
CX3CL1P78423 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CX3CL1P78423 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CX3CL1P78423 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CX3CL1P78423 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC11.82□□□□□ -0.52
CX3CL1P78423 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.82□□□□□ -0.52
CX3CL1P78423 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CX3CL1P78423 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CX3CL1P78423 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
CX3CL1P78423 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.82□□□□□ -0.52
CX3CL1P78423 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.81□□□□□ -0.52
CX3CL1P78423 AL354702.1-201ENST00000442006 1960 ntBASIC11.81□□□□□ -0.52
CX3CL1P78423 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.81□□□□□ -0.52
CX3CL1P78423 USP3-204ENST00000540797 5474 ntTSL 2 BASIC11.81□□□□□ -0.52
CX3CL1P78423 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 AL354989.2-201ENST00000435838 1540 ntBASIC11.81□□□□□ -0.52
CX3CL1P78423 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC11.81□□□□□ -0.52
CX3CL1P78423 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
CX3CL1P78423 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC11.81□□□□□ -0.52
CX3CL1P78423 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CX3CL1P78423 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 AC006001.1-201ENST00000325130 474 ntBASIC11.81□□□□□ -0.52
CX3CL1P78423 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC11.81□□□□□ -0.52
CX3CL1P78423 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
CX3CL1P78423 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 PGF-202ENST00000405431 666 ntTSL 5 BASIC11.81□□□□□ -0.52
CX3CL1P78423 AC112492.5-201ENST00000421897 457 ntBASIC11.81□□□□□ -0.52
CX3CL1P78423 RPL7P3-201ENST00000441388 714 ntBASIC11.81□□□□□ -0.52
CX3CL1P78423 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 NAA50-208ENST00000497255 789 ntTSL 5 BASIC11.81□□□□□ -0.52
CX3CL1P78423 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC11.81□□□□□ -0.52
CX3CL1P78423 GCOM2-201ENST00000509133 1104 ntBASIC11.81□□□□□ -0.52
CX3CL1P78423 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC11.81□□□□□ -0.52
CX3CL1P78423 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC11.81□□□□□ -0.52
CX3CL1P78423 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC11.81□□□□□ -0.52
CX3CL1P78423 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
CX3CL1P78423 AP000812.2-201ENST00000538934 718 ntBASIC11.81□□□□□ -0.52
CX3CL1P78423 AC106820.3-201ENST00000561653 397 ntBASIC11.81□□□□□ -0.52
CX3CL1P78423 AL512343.1-201ENST00000605837 169 ntBASIC11.81□□□□□ -0.52
CX3CL1P78423 RHOXF1P1-202ENST00000635473 501 ntBASIC11.81□□□□□ -0.52
CX3CL1P78423 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC11.81□□□□□ -0.52
CX3CL1P78423 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
CX3CL1P78423 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC11.81□□□□□ -0.52
CX3CL1P78423 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
CX3CL1P78423 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.81□□□□□ -0.52
CX3CL1P78423 MRPL37P1-201ENST00000592451 1337 ntBASIC11.81□□□□□ -0.52
CX3CL1P78423 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.81□□□□□ -0.52
CX3CL1P78423 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms