Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RHBDL3P58872 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RHBDL3P58872 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RHBDL3P58872 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RHBDL3P58872 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.96■□□□□ 0.3
RHBDL3P58872 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RHBDL3P58872 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RHBDL3P58872 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.96■□□□□ 0.3
RHBDL3P58872 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.96■□□□□ 0.3
RHBDL3P58872 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.96■□□□□ 0.3
RHBDL3P58872 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.96■□□□□ 0.3
RHBDL3P58872 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RHBDL3P58872 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RHBDL3P58872 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RHBDL3P58872 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDL3P58872 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.95■□□□□ 0.3
RHBDL3P58872 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDL3P58872 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RHBDL3P58872 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDL3P58872 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.95■□□□□ 0.3
RHBDL3P58872 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RHBDL3P58872 AC012617.1-204ENST00000586340 2305 ntBASIC16.95■□□□□ 0.3
RHBDL3P58872 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.95■□□□□ 0.3
RHBDL3P58872 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDL3P58872 AC103592.1-201ENST00000394513 664 ntBASIC16.95■□□□□ 0.3
RHBDL3P58872 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
RHBDL3P58872 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDL3P58872 PIN4P1-201ENST00000451079 396 ntBASIC16.95■□□□□ 0.3
RHBDL3P58872 BUD31-205ENST00000456893 512 ntTSL 5 BASIC16.95■□□□□ 0.3
RHBDL3P58872 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.95■□□□□ 0.3
RHBDL3P58872 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.95■□□□□ 0.3
RHBDL3P58872 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.95■□□□□ 0.3
RHBDL3P58872 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDL3P58872 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.95■□□□□ 0.3
RHBDL3P58872 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.95■□□□□ 0.3
RHBDL3P58872 AL390755.1-201ENST00000623716 2027 ntBASIC16.95■□□□□ 0.3
RHBDL3P58872 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDL3P58872 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RHBDL3P58872 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDL3P58872 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDL3P58872 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RHBDL3P58872 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.95■□□□□ 0.3
RHBDL3P58872 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDL3P58872 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC16.95■□□□□ 0.3
RHBDL3P58872 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDL3P58872 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RHBDL3P58872 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDL3P58872 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDL3P58872 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.94■□□□□ 0.3
RHBDL3P58872 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.94■□□□□ 0.3
RHBDL3P58872 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDL3P58872 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDL3P58872 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
RHBDL3P58872 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.94■□□□□ 0.3
RHBDL3P58872 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.94■□□□□ 0.3
RHBDL3P58872 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDL3P58872 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.94■□□□□ 0.3
RHBDL3P58872 RPL13AP3-202ENST00000494676 1473 ntBASIC16.94■□□□□ 0.3
RHBDL3P58872 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.94■□□□□ 0.3
RHBDL3P58872 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDL3P58872 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDL3P58872 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
RHBDL3P58872 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RHBDL3P58872 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RHBDL3P58872 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RHBDL3P58872 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDL3P58872 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDL3P58872 RN7SKP109-201ENST00000410592 316 ntBASIC16.94■□□□□ 0.3
RHBDL3P58872 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.94■□□□□ 0.3
RHBDL3P58872 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC16.94■□□□□ 0.3
RHBDL3P58872 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.94■□□□□ 0.3
RHBDL3P58872 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC16.94■□□□□ 0.3
RHBDL3P58872 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDL3P58872 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC16.94■□□□□ 0.3
RHBDL3P58872 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.94■□□□□ 0.3
RHBDL3P58872 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.94■□□□□ 0.3
RHBDL3P58872 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.94■□□□□ 0.3
RHBDL3P58872 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RHBDL3P58872 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.94■□□□□ 0.3
RHBDL3P58872 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.94■□□□□ 0.3
RHBDL3P58872 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.94■□□□□ 0.3
RHBDL3P58872 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDL3P58872 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RHBDL3P58872 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDL3P58872 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDL3P58872 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RHBDL3P58872 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RHBDL3P58872 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
RHBDL3P58872 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
RHBDL3P58872 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RHBDL3P58872 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms