Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 ANGEL2-208ENST00000535388 2517 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NKX2-5P52952 AC093525.7-201ENST00000569852 3626 ntBASIC12.36□□□□□ -0.43
NKX2-5P52952 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NKX2-5P52952 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.36□□□□□ -0.43
NKX2-5P52952 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NKX2-5P52952 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
NKX2-5P52952 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
NKX2-5P52952 CD27-AS1-209ENST00000545339 1766 ntTSL 5 BASIC12.35□□□□□ -0.43
NKX2-5P52952 NR4A3-203ENST00000395097 3794 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
NKX2-5P52952 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 CARF-213ENST00000438828 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC12.35□□□□□ -0.43
NKX2-5P52952 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC12.35□□□□□ -0.43
NKX2-5P52952 CYP4F24P-201ENST00000586049 1580 ntBASIC12.35□□□□□ -0.43
NKX2-5P52952 ENOSF1-203ENST00000383578 4188 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
NKX2-5P52952 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
NKX2-5P52952 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.35□□□□□ -0.43
NKX2-5P52952 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
NKX2-5P52952 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
NKX2-5P52952 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.35□□□□□ -0.43
NKX2-5P52952 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.35□□□□□ -0.43
NKX2-5P52952 EEF1DP4-201ENST00000446006 880 ntBASIC12.35□□□□□ -0.43
NKX2-5P52952 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 KRT18P31-201ENST00000506277 1292 ntBASIC12.35□□□□□ -0.43
NKX2-5P52952 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
NKX2-5P52952 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 AC009955.4-201ENST00000597192 544 ntBASIC12.35□□□□□ -0.43
NKX2-5P52952 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC12.35□□□□□ -0.43
NKX2-5P52952 AC004706.3-202ENST00000621574 984 ntBASIC12.35□□□□□ -0.43
NKX2-5P52952 TMEM191A-211ENST00000637163 1067 ntBASIC12.35□□□□□ -0.43
NKX2-5P52952 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 NUF2-201ENST00000271452 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC12.35□□□□□ -0.43
NKX2-5P52952 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 ZNF133-201ENST00000316358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC12.35□□□□□ -0.43
NKX2-5P52952 KCNAB2-202ENST00000341524 4207 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.35□□□□□ -0.43
NKX2-5P52952 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
NKX2-5P52952 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 USB1-207ENST00000563149 1751 ntTSL 2 BASIC12.35□□□□□ -0.43
NKX2-5P52952 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
NKX2-5P52952 MMD2-203ENST00000406755 2372 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 ATG13-211ENST00000528494 2351 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC12.35□□□□□ -0.43
NKX2-5P52952 NBN-203ENST00000409330 4523 ntTSL 5 BASIC12.35□□□□□ -0.43
NKX2-5P52952 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
NKX2-5P52952 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC12.35□□□□□ -0.43
NKX2-5P52952 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.35□□□□□ -0.43
NKX2-5P52952 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.35□□□□□ -0.43
NKX2-5P52952 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
NKX2-5P52952 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC12.35□□□□□ -0.43
NKX2-5P52952 TUBB8P4-201ENST00000511806 1324 ntBASIC12.35□□□□□ -0.43
NKX2-5P52952 TREH-201ENST00000264029 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 STRADA-204ENST00000392950 2778 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
NKX2-5P52952 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 ARHGAP6-201ENST00000303025 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 SHC1P1-201ENST00000425230 1745 ntBASIC12.34□□□□□ -0.43
NKX2-5P52952 SEC24B-203ENST00000504968 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
NKX2-5P52952 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX2-5P52952 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC12.34□□□□□ -0.43
NKX2-5P52952 MATN2-218ENST00000524308 3449 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX2-5P52952 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX2-5P52952 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NKX2-5P52952 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC12.34□□□□□ -0.43
NKX2-5P52952 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC12.34□□□□□ -0.43
NKX2-5P52952 AC112907.2-201ENST00000448639 330 ntBASIC12.34□□□□□ -0.43
NKX2-5P52952 NME4-207ENST00000450036 985 ntTSL 3 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms