Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.28□□□□□ -0.28
HMGA2P52926 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HMGA2P52926 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HMGA2P52926 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.28□□□□□ -0.28
HMGA2P52926 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 BAATP1-201ENST00000412284 1225 ntBASIC13.28□□□□□ -0.28
HMGA2P52926 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.28□□□□□ -0.28
HMGA2P52926 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.28□□□□□ -0.28
HMGA2P52926 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.28□□□□□ -0.28
HMGA2P52926 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.28□□□□□ -0.28
HMGA2P52926 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.28□□□□□ -0.28
HMGA2P52926 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.28□□□□□ -0.28
HMGA2P52926 PAM16-211ENST00000575848 518 ntTSL 3 BASIC13.28□□□□□ -0.28
HMGA2P52926 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
HMGA2P52926 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.28□□□□□ -0.28
HMGA2P52926 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.28□□□□□ -0.28
HMGA2P52926 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 AC027601.3-201ENST00000622907 509 ntBASIC13.28□□□□□ -0.28
HMGA2P52926 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.28□□□□□ -0.28
HMGA2P52926 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
HMGA2P52926 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HMGA2P52926 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.28□□□□□ -0.28
HMGA2P52926 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.28□□□□□ -0.28
HMGA2P52926 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.28□□□□□ -0.28
HMGA2P52926 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.28□□□□□ -0.28
HMGA2P52926 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
HMGA2P52926 MKRN5P-201ENST00000445263 1467 ntBASIC13.28□□□□□ -0.28
HMGA2P52926 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 AC083964.2-201ENST00000623988 2396 ntBASIC13.28□□□□□ -0.28
HMGA2P52926 ABCD1P2-201ENST00000429313 1601 ntBASIC13.28□□□□□ -0.28
HMGA2P52926 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.28□□□□□ -0.28
HMGA2P52926 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
HMGA2P52926 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
HMGA2P52926 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.27□□□□□ -0.28
HMGA2P52926 MSTO2P-201ENST00000314835 1709 ntBASIC13.27□□□□□ -0.28
HMGA2P52926 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGA2P52926 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
HMGA2P52926 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.27□□□□□ -0.28
HMGA2P52926 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
HMGA2P52926 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
HMGA2P52926 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGA2P52926 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGA2P52926 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.27□□□□□ -0.28
HMGA2P52926 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HMGA2P52926 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.27□□□□□ -0.28
HMGA2P52926 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGA2P52926 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGA2P52926 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
HMGA2P52926 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
HMGA2P52926 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.27□□□□□ -0.28
HMGA2P52926 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.28
HMGA2P52926 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
HMGA2P52926 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.27□□□□□ -0.28
HMGA2P52926 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.27□□□□□ -0.29
HMGA2P52926 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC13.27□□□□□ -0.29
HMGA2P52926 KRT18P15-201ENST00000458108 1291 ntBASIC13.27□□□□□ -0.29
HMGA2P52926 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.27□□□□□ -0.29
HMGA2P52926 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.27□□□□□ -0.29
HMGA2P52926 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.27□□□□□ -0.29
HMGA2P52926 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.27□□□□□ -0.29
HMGA2P52926 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.27□□□□□ -0.29
HMGA2P52926 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.27□□□□□ -0.29
HMGA2P52926 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.27□□□□□ -0.29
HMGA2P52926 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.27□□□□□ -0.29
HMGA2P52926 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.27□□□□□ -0.29
HMGA2P52926 CTBP2P3-201ENST00000585629 1255 ntBASIC13.27□□□□□ -0.29
HMGA2P52926 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 AC005498.2-205ENST00000593218 784 ntBASIC13.27□□□□□ -0.29
HMGA2P52926 CR392039.2-201ENST00000623182 509 ntBASIC13.27□□□□□ -0.29
HMGA2P52926 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
HMGA2P52926 AC007541.1-201ENST00000570282 1469 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms