Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC13.78□□□□□ -0.2
KNTC1P50748 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.78□□□□□ -0.2
KNTC1P50748 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.78□□□□□ -0.2
KNTC1P50748 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.78□□□□□ -0.2
KNTC1P50748 PPP1R2P4-201ENST00000424051 595 ntBASIC13.78□□□□□ -0.2
KNTC1P50748 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
KNTC1P50748 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
KNTC1P50748 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC13.78□□□□□ -0.2
KNTC1P50748 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC13.78□□□□□ -0.2
KNTC1P50748 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC13.78□□□□□ -0.2
KNTC1P50748 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC13.78□□□□□ -0.2
KNTC1P50748 AP005264.6-204ENST00000588436 719 ntBASIC13.78□□□□□ -0.2
KNTC1P50748 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC13.78□□□□□ -0.2
KNTC1P50748 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
KNTC1P50748 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
KNTC1P50748 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
KNTC1P50748 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
KNTC1P50748 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
KNTC1P50748 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
KNTC1P50748 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
KNTC1P50748 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.78□□□□□ -0.2
KNTC1P50748 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
KNTC1P50748 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
KNTC1P50748 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 FTX-216ENST00000638985 1367 ntTSL 5 BASIC13.78□□□□□ -0.2
KNTC1P50748 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.78□□□□□ -0.2
KNTC1P50748 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
KNTC1P50748 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
KNTC1P50748 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.78□□□□□ -0.2
KNTC1P50748 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
KNTC1P50748 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
KNTC1P50748 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 DUX4L50-201ENST00000455245 715 ntBASIC13.78□□□□□ -0.2
KNTC1P50748 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
KNTC1P50748 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC13.78□□□□□ -0.2
KNTC1P50748 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC13.78□□□□□ -0.2
KNTC1P50748 TRMT112P3-201ENST00000580149 358 ntBASIC13.78□□□□□ -0.2
KNTC1P50748 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC13.78□□□□□ -0.2
KNTC1P50748 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
KNTC1P50748 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.78□□□□□ -0.2
KNTC1P50748 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.78□□□□□ -0.2
KNTC1P50748 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
KNTC1P50748 TEKT4P2-202ENST00000559466 1312 ntBASIC13.77□□□□□ -0.2
KNTC1P50748 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
KNTC1P50748 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
KNTC1P50748 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.2
KNTC1P50748 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
KNTC1P50748 AL162727.3-201ENST00000635661 2787 ntBASIC13.77□□□□□ -0.2
KNTC1P50748 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC13.77□□□□□ -0.2
KNTC1P50748 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
KNTC1P50748 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
KNTC1P50748 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
KNTC1P50748 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
KNTC1P50748 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.77□□□□□ -0.2
KNTC1P50748 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.77□□□□□ -0.2
KNTC1P50748 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
KNTC1P50748 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.77□□□□□ -0.21
KNTC1P50748 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
KNTC1P50748 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KNTC1P50748 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
KNTC1P50748 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KNTC1P50748 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
KNTC1P50748 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KNTC1P50748 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KNTC1P50748 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
KNTC1P50748 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.77□□□□□ -0.21
KNTC1P50748 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KNTC1P50748 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC13.77□□□□□ -0.21
KNTC1P50748 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.77□□□□□ -0.21
KNTC1P50748 EIF5AP2-201ENST00000585668 1047 ntBASIC13.77□□□□□ -0.21
KNTC1P50748 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
KNTC1P50748 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KNTC1P50748 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
KNTC1P50748 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KNTC1P50748 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KNTC1P50748 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KNTC1P50748 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
KNTC1P50748 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.77□□□□□ -0.21
KNTC1P50748 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
KNTC1P50748 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
KNTC1P50748 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
KNTC1P50748 SSR4P1-203ENST00000599569 2260 ntBASIC13.77□□□□□ -0.21
KNTC1P50748 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
KNTC1P50748 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms