Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.87□□□□□ -0.35
CX3CR1P49238 AC025279.2-201ENST00000569730 653 ntBASIC12.87□□□□□ -0.35
CX3CR1P49238 BX088702.1-201ENST00000610784 235 ntBASIC12.87□□□□□ -0.35
CX3CR1P49238 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.87□□□□□ -0.35
CX3CR1P49238 AL354718.3-201ENST00000616414 581 ntBASIC12.87□□□□□ -0.35
CX3CR1P49238 CR382287.1-201ENST00000623954 586 ntBASIC12.87□□□□□ -0.35
CX3CR1P49238 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.87□□□□□ -0.35
CX3CR1P49238 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CX3CR1P49238 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC12.87□□□□□ -0.35
CX3CR1P49238 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CX3CR1P49238 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CX3CR1P49238 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CX3CR1P49238 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.87□□□□□ -0.35
CX3CR1P49238 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
CX3CR1P49238 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 AC009093.2-202ENST00000620513 2079 ntBASIC12.87□□□□□ -0.35
CX3CR1P49238 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CX3CR1P49238 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
CX3CR1P49238 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CX3CR1P49238 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.86□□□□□ -0.35
CX3CR1P49238 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CX3CR1P49238 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.86□□□□□ -0.35
CX3CR1P49238 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.86□□□□□ -0.35
CX3CR1P49238 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.86□□□□□ -0.35
CX3CR1P49238 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
CX3CR1P49238 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.86□□□□□ -0.35
CX3CR1P49238 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 AC005229.1-201ENST00000392885 409 ntBASIC12.86□□□□□ -0.35
CX3CR1P49238 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.86□□□□□ -0.35
CX3CR1P49238 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC12.86□□□□□ -0.35
CX3CR1P49238 PUDPP3-201ENST00000445368 636 ntBASIC12.86□□□□□ -0.35
CX3CR1P49238 AL590640.2-201ENST00000457038 527 ntBASIC12.86□□□□□ -0.35
CX3CR1P49238 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.86□□□□□ -0.35
CX3CR1P49238 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.86□□□□□ -0.35
CX3CR1P49238 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.86□□□□□ -0.35
CX3CR1P49238 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.86□□□□□ -0.35
CX3CR1P49238 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.86□□□□□ -0.35
CX3CR1P49238 AC106820.3-201ENST00000561653 397 ntBASIC12.86□□□□□ -0.35
CX3CR1P49238 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.86□□□□□ -0.35
CX3CR1P49238 GNRHR2-203ENST00000581100 1187 ntBASIC12.86□□□□□ -0.35
CX3CR1P49238 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC12.86□□□□□ -0.35
CX3CR1P49238 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC12.86□□□□□ -0.35
CX3CR1P49238 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC12.86□□□□□ -0.35
CX3CR1P49238 AC132938.4-201ENST00000623835 848 ntBASIC12.86□□□□□ -0.35
CX3CR1P49238 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC12.86□□□□□ -0.35
CX3CR1P49238 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC12.86□□□□□ -0.35
CX3CR1P49238 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 TCAM1P-207ENST00000485295 1537 ntBASIC12.86□□□□□ -0.35
CX3CR1P49238 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.86□□□□□ -0.35
CX3CR1P49238 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.86□□□□□ -0.35
CX3CR1P49238 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CX3CR1P49238 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CX3CR1P49238 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
CX3CR1P49238 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CX3CR1P49238 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.86□□□□□ -0.35
CX3CR1P49238 AL590440.2-201ENST00000641973 1595 ntBASIC12.86□□□□□ -0.35
CX3CR1P49238 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.86□□□□□ -0.35
CX3CR1P49238 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.86□□□□□ -0.35
CX3CR1P49238 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.85□□□□□ -0.35
CX3CR1P49238 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.85□□□□□ -0.35
CX3CR1P49238 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CX3CR1P49238 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CX3CR1P49238 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CX3CR1P49238 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CX3CR1P49238 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CX3CR1P49238 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CX3CR1P49238 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms