Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CSNK1A1P48729 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CSNK1A1P48729 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.02□□□□□ -0.33
CSNK1A1P48729 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CSNK1A1P48729 HSPA7-201ENST00000445535 1927 ntBASIC13.01□□□□□ -0.33
CSNK1A1P48729 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 AC079178.1-201ENST00000420915 656 ntBASIC13.01□□□□□ -0.33
CSNK1A1P48729 CSF2RBP1-201ENST00000447905 391 ntBASIC13.01□□□□□ -0.33
CSNK1A1P48729 KRT223P-202ENST00000449164 1292 ntBASIC13.01□□□□□ -0.33
CSNK1A1P48729 AC022210.1-201ENST00000449856 793 ntBASIC13.01□□□□□ -0.33
CSNK1A1P48729 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 IGHV3-71-201ENST00000523324 359 ntBASIC13.01□□□□□ -0.33
CSNK1A1P48729 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 AC027237.1-201ENST00000560942 655 ntBASIC13.01□□□□□ -0.33
CSNK1A1P48729 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 AC027601.5-201ENST00000624065 2482 ntBASIC13.01□□□□□ -0.33
CSNK1A1P48729 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.01□□□□□ -0.33
CSNK1A1P48729 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CSNK1A1P48729 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 RET-205ENST00000615310 4337 ntTSL 5 BASIC13□□□□□ -0.33
CSNK1A1P48729 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
CSNK1A1P48729 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13□□□□□ -0.33
CSNK1A1P48729 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13□□□□□ -0.33
CSNK1A1P48729 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13□□□□□ -0.33
CSNK1A1P48729 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13□□□□□ -0.33
CSNK1A1P48729 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13□□□□□ -0.33
CSNK1A1P48729 AL023775.1-201ENST00000454907 1746 ntBASIC13□□□□□ -0.33
CSNK1A1P48729 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13□□□□□ -0.33
CSNK1A1P48729 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13□□□□□ -0.33
CSNK1A1P48729 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13□□□□□ -0.33
CSNK1A1P48729 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
CSNK1A1P48729 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13□□□□□ -0.33
CSNK1A1P48729 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13□□□□□ -0.33
CSNK1A1P48729 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13□□□□□ -0.33
CSNK1A1P48729 HNRNPA1P27-201ENST00000412087 955 ntBASIC13□□□□□ -0.33
CSNK1A1P48729 AC099336.1-201ENST00000417053 1171 ntBASIC13□□□□□ -0.33
CSNK1A1P48729 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13□□□□□ -0.33
CSNK1A1P48729 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13□□□□□ -0.33
CSNK1A1P48729 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13□□□□□ -0.33
CSNK1A1P48729 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CSNK1A1P48729 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13□□□□□ -0.33
CSNK1A1P48729 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 COX11-210ENST00000639671 696 ntBASIC13□□□□□ -0.33
CSNK1A1P48729 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CSNK1A1P48729 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms