Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
RPA3P35244 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.79□□□□□ -0.04
RPA3P35244 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.79□□□□□ -0.04
RPA3P35244 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.79□□□□□ -0.04
RPA3P35244 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 KRT8P35-201ENST00000483942 1338 ntBASIC14.79□□□□□ -0.04
RPA3P35244 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.79□□□□□ -0.04
RPA3P35244 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RPA3P35244 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
RPA3P35244 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.79□□□□□ -0.04
RPA3P35244 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.79□□□□□ -0.04
RPA3P35244 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.79□□□□□ -0.04
RPA3P35244 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.79□□□□□ -0.04
RPA3P35244 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.79□□□□□ -0.04
RPA3P35244 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RPA3P35244 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RPA3P35244 PRSS30P-206ENST00000641773 873 ntBASIC14.79□□□□□ -0.04
RPA3P35244 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 AL365181.3-201ENST00000605886 3222 ntBASIC14.79□□□□□ -0.04
RPA3P35244 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPA3P35244 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
RPA3P35244 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.78□□□□□ -0.04
RPA3P35244 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.78□□□□□ -0.04
RPA3P35244 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
RPA3P35244 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 KRT17P7-201ENST00000451704 1104 ntBASIC14.78□□□□□ -0.04
RPA3P35244 INE1-201ENST00000456273 945 ntBASIC14.78□□□□□ -0.04
RPA3P35244 RN7SL837P-201ENST00000463010 287 ntBASIC14.78□□□□□ -0.04
RPA3P35244 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.78□□□□□ -0.04
RPA3P35244 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 KRT18P25-201ENST00000508931 1278 ntBASIC14.78□□□□□ -0.04
RPA3P35244 CLUHP6-201ENST00000580789 941 ntBASIC14.78□□□□□ -0.04
RPA3P35244 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 AC010319.3-201ENST00000597028 470 ntBASIC14.78□□□□□ -0.04
RPA3P35244 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 AP005019.2-201ENST00000615104 511 ntBASIC14.78□□□□□ -0.04
RPA3P35244 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.78□□□□□ -0.04
RPA3P35244 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.78□□□□□ -0.04
RPA3P35244 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPA3P35244 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.78□□□□□ -0.04
RPA3P35244 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
RPA3P35244 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPA3P35244 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RPA3P35244 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.77□□□□□ -0.04
RPA3P35244 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
RPA3P35244 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPA3P35244 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPA3P35244 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPA3P35244 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms