Protein–RNA interactions for Protein: P33778

HIST1H2BB, Histone H2B type 1-B, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BBP33778 LSINCT5-201ENST00000626215 2647 ntBASIC10.91□□□□□ -0.66
HIST1H2BBP33778 SLC45A3-201ENST00000367145 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 FAM161A-203ENST00000405894 3684 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 ELK2BP-201ENST00000415014 1224 ntBASIC10.91□□□□□ -0.66
HIST1H2BBP33778 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 THAP5-204ENST00000438865 868 ntTSL 2 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 AC112907.2-201ENST00000448639 330 ntBASIC10.91□□□□□ -0.66
HIST1H2BBP33778 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 AC109635.5-201ENST00000533593 962 ntBASIC10.91□□□□□ -0.66
HIST1H2BBP33778 NKAPP1-205ENST00000585790 367 ntBASIC10.91□□□□□ -0.66
HIST1H2BBP33778 AC092364.2-202ENST00000597012 1073 ntBASIC10.91□□□□□ -0.66
HIST1H2BBP33778 AC104771.1-201ENST00000603335 964 ntBASIC10.91□□□□□ -0.66
HIST1H2BBP33778 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 AC011558.1-201ENST00000623459 338 ntBASIC10.91□□□□□ -0.66
HIST1H2BBP33778 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 ZSCAN20-202ENST00000373413 2367 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 PTPRVP-205ENST00000641549 5067 ntBASIC10.91□□□□□ -0.66
HIST1H2BBP33778 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 HIF3A-204ENST00000300862 2551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 AGPAT1-204ENST00000395496 2103 ntAPPRIS P1 TSL 3 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 AC009533.1-201ENST00000539757 3158 ntBASIC10.91□□□□□ -0.66
HIST1H2BBP33778 FAM177A1-201ENST00000280987 2927 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 NUSAP1-208ENST00000559596 1629 ntAPPRIS P4 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 CLEC4F-201ENST00000272367 2475 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
HIST1H2BBP33778 EXOC7-216ENST00000589210 4751 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 AL357054.4-201ENST00000606285 2814 ntBASIC10.9□□□□□ -0.66
HIST1H2BBP33778 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 KRT17P7-202ENST00000582261 2334 ntTSL 5 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 CPT1C-203ENST00000392518 2910 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 UBE2L3-204ENST00000545681 2932 ntTSL 2 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 BORA-202ENST00000377815 1673 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 AL805961.2-201ENST00000642139 4817 ntBASIC10.9□□□□□ -0.66
HIST1H2BBP33778 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 AC026271.2-201ENST00000428091 497 ntBASIC10.9□□□□□ -0.66
HIST1H2BBP33778 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
HIST1H2BBP33778 AC098859.1-201ENST00000502915 1238 ntBASIC10.9□□□□□ -0.66
HIST1H2BBP33778 AL031432.2-201ENST00000566714 459 ntBASIC10.9□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms