Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CHMLP26374 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.49■□□□□ 0.39
CHMLP26374 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMLP26374 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMLP26374 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMLP26374 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMLP26374 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMLP26374 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMLP26374 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMLP26374 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMLP26374 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CHMLP26374 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMLP26374 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CHMLP26374 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CHMLP26374 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.49■□□□□ 0.39
CHMLP26374 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMLP26374 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMLP26374 AC012441.2-201ENST00000444843 739 ntBASIC17.49■□□□□ 0.39
CHMLP26374 KRT223P-202ENST00000449164 1292 ntBASIC17.49■□□□□ 0.39
CHMLP26374 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMLP26374 RPSAP36-202ENST00000494591 1261 ntBASIC17.49■□□□□ 0.39
CHMLP26374 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.49■□□□□ 0.39
CHMLP26374 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMLP26374 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.49■□□□□ 0.39
CHMLP26374 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17.49■□□□□ 0.39
CHMLP26374 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMLP26374 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMLP26374 AC005730.2-201ENST00000564549 1184 ntBASIC17.49■□□□□ 0.39
CHMLP26374 AC133552.6-201ENST00000613406 534 ntBASIC17.49■□□□□ 0.39
CHMLP26374 AC009542.2-202ENST00000619004 1067 ntBASIC17.49■□□□□ 0.39
CHMLP26374 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.49■□□□□ 0.39
CHMLP26374 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC17.49■□□□□ 0.39
CHMLP26374 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMLP26374 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMLP26374 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMLP26374 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMLP26374 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
CHMLP26374 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC17.49■□□□□ 0.39
CHMLP26374 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CHMLP26374 LAP3P2-201ENST00000454686 1454 ntBASIC17.49■□□□□ 0.39
CHMLP26374 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC17.49■□□□□ 0.39
CHMLP26374 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CHMLP26374 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CHMLP26374 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CHMLP26374 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CHMLP26374 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.49■□□□□ 0.39
CHMLP26374 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CHMLP26374 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
CHMLP26374 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMLP26374 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.48■□□□□ 0.39
CHMLP26374 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CHMLP26374 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CHMLP26374 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 LINC02486-201ENST00000604157 3000 ntBASIC17.48■□□□□ 0.39
CHMLP26374 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CHMLP26374 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC17.48■□□□□ 0.39
CHMLP26374 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.48■□□□□ 0.39
CHMLP26374 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMLP26374 FAM58BP-201ENST00000439056 645 ntBASIC17.48■□□□□ 0.39
CHMLP26374 AC006122.1-201ENST00000493323 440 ntBASIC17.48■□□□□ 0.39
CHMLP26374 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMLP26374 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMLP26374 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.48■□□□□ 0.39
CHMLP26374 AC009884.2-201ENST00000603110 324 ntBASIC17.48■□□□□ 0.39
CHMLP26374 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMLP26374 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC17.48■□□□□ 0.39
CHMLP26374 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMLP26374 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC17.48■□□□□ 0.39
CHMLP26374 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CHMLP26374 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC17.48■□□□□ 0.39
CHMLP26374 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CHMLP26374 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CHMLP26374 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMLP26374 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC17.47■□□□□ 0.39
CHMLP26374 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.47■□□□□ 0.39
CHMLP26374 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMLP26374 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC17.47■□□□□ 0.39
CHMLP26374 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CHMLP26374 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms