Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AC117500.6-201ENST00000624871 588 ntBASIC11.25□□□□□ -0.61
RAB4AP20338 HERC2P9-206ENST00000529624 5187 ntBASIC11.25□□□□□ -0.61
RAB4AP20338 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC11.25□□□□□ -0.61
RAB4AP20338 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
RAB4AP20338 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 BCL9-201ENST00000234739 6278 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 BX537318.2-201ENST00000624893 4162 ntBASIC11.25□□□□□ -0.61
RAB4AP20338 HARS-207ENST00000504156 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
RAB4AP20338 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.25□□□□□ -0.61
RAB4AP20338 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC11.25□□□□□ -0.61
RAB4AP20338 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
RAB4AP20338 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
RAB4AP20338 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC11.24□□□□□ -0.61
RAB4AP20338 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
RAB4AP20338 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RAB4AP20338 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
RAB4AP20338 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 KCNMA1-227ENST00000638203 3840 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RAB4AP20338 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC11.24□□□□□ -0.61
RAB4AP20338 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
RAB4AP20338 RPS2P28-201ENST00000314255 741 ntBASIC11.24□□□□□ -0.61
RAB4AP20338 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.24□□□□□ -0.61
RAB4AP20338 CRYGEP-201ENST00000412192 528 ntBASIC11.24□□□□□ -0.61
RAB4AP20338 HNRNPDP1-201ENST00000439535 754 ntBASIC11.24□□□□□ -0.61
RAB4AP20338 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC11.24□□□□□ -0.61
RAB4AP20338 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.24□□□□□ -0.61
RAB4AP20338 AL138918.1-201ENST00000568306 659 ntBASIC11.24□□□□□ -0.61
RAB4AP20338 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.24□□□□□ -0.61
RAB4AP20338 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC11.24□□□□□ -0.61
RAB4AP20338 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.24□□□□□ -0.61
RAB4AP20338 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
RAB4AP20338 FAM237B-201ENST00000637645 3877 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
RAB4AP20338 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC11.24□□□□□ -0.61
RAB4AP20338 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC11.24□□□□□ -0.61
RAB4AP20338 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 AC092123.2-201ENST00000611189 5421 ntBASIC11.24□□□□□ -0.61
RAB4AP20338 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.24□□□□□ -0.61
RAB4AP20338 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC11.24□□□□□ -0.61
RAB4AP20338 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.24□□□□□ -0.61
RAB4AP20338 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC11.24□□□□□ -0.61
RAB4AP20338 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 ORAI2-210ENST00000611770 10679 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
RAB4AP20338 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
RAB4AP20338 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.24□□□□□ -0.61
RAB4AP20338 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC11.24□□□□□ -0.61
RAB4AP20338 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
RAB4AP20338 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC11.24□□□□□ -0.61
RAB4AP20338 GPR55-205ENST00000622008 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
RAB4AP20338 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
RAB4AP20338 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
RAB4AP20338 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB4AP20338 AC016397.2-201ENST00000624848 1985 ntBASIC11.23□□□□□ -0.61
RAB4AP20338 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC11.23□□□□□ -0.61
RAB4AP20338 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.23□□□□□ -0.61
RAB4AP20338 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
RAB4AP20338 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms