Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 RN7SL788P-201ENST00000460504 316 ntBASIC15.6■□□□□ 0.09
SYN1P17600 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC15.6■□□□□ 0.09
SYN1P17600 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC15.6■□□□□ 0.09
SYN1P17600 AC113347.2-201ENST00000512350 279 ntBASIC15.6■□□□□ 0.09
SYN1P17600 AC100858.1-201ENST00000514059 1228 ntBASIC15.6■□□□□ 0.09
SYN1P17600 AC142086.5-202ENST00000562500 217 ntBASIC15.6■□□□□ 0.09
SYN1P17600 SLC9A3R2-204ENST00000563587 1037 ntTSL 2 BASIC15.6■□□□□ 0.09
SYN1P17600 CES1P2-201ENST00000566467 1242 ntBASIC15.6■□□□□ 0.09
SYN1P17600 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC15.6■□□□□ 0.09
SYN1P17600 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SYN1P17600 AC091769.1-201ENST00000619576 568 ntBASIC15.6■□□□□ 0.09
SYN1P17600 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC15.6■□□□□ 0.09
SYN1P17600 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.6■□□□□ 0.09
SYN1P17600 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SYN1P17600 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.6■□□□□ 0.09
SYN1P17600 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SYN1P17600 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SYN1P17600 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SYN1P17600 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.6■□□□□ 0.09
SYN1P17600 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SYN1P17600 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SYN1P17600 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SYN1P17600 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.59■□□□□ 0.09
SYN1P17600 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.59■□□□□ 0.09
SYN1P17600 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SYN1P17600 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SYN1P17600 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC15.59■□□□□ 0.09
SYN1P17600 GGTLC4P-201ENST00000402176 664 ntBASIC15.59■□□□□ 0.09
SYN1P17600 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SYN1P17600 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC15.59■□□□□ 0.09
SYN1P17600 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC15.59■□□□□ 0.09
SYN1P17600 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SYN1P17600 AC025594.1-201ENST00000469533 543 ntBASIC15.59■□□□□ 0.09
SYN1P17600 HNRNPA1P56-201ENST00000505767 954 ntBASIC15.59■□□□□ 0.09
SYN1P17600 AP000920.1-201ENST00000531824 344 ntBASIC15.59■□□□□ 0.09
SYN1P17600 AC087203.1-201ENST00000532111 1181 ntBASIC15.59■□□□□ 0.09
SYN1P17600 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC15.59■□□□□ 0.09
SYN1P17600 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.59■□□□□ 0.09
SYN1P17600 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
SYN1P17600 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SYN1P17600 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC15.59■□□□□ 0.09
SYN1P17600 AL591424.3-201ENST00000614278 872 ntBASIC15.59■□□□□ 0.09
SYN1P17600 AC020904.3-201ENST00000624199 442 ntBASIC15.59■□□□□ 0.09
SYN1P17600 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC15.59■□□□□ 0.09
SYN1P17600 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.59■□□□□ 0.09
SYN1P17600 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.59■□□□□ 0.09
SYN1P17600 LINC00528-201ENST00000600723 2160 ntBASIC15.59■□□□□ 0.09
SYN1P17600 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SYN1P17600 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
SYN1P17600 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC15.58■□□□□ 0.09
SYN1P17600 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.58■□□□□ 0.09
SYN1P17600 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
SYN1P17600 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SYN1P17600 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SYN1P17600 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.58■□□□□ 0.08
SYN1P17600 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.58■□□□□ 0.08
SYN1P17600 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYN1P17600 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYN1P17600 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.58■□□□□ 0.08
SYN1P17600 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYN1P17600 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYN1P17600 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYN1P17600 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SYN1P17600 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYN1P17600 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
SYN1P17600 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYN1P17600 AC006987.1-201ENST00000413610 527 ntBASIC15.58■□□□□ 0.08
SYN1P17600 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC15.58■□□□□ 0.08
SYN1P17600 RN7SL128P-201ENST00000467883 305 ntBASIC15.58■□□□□ 0.08
SYN1P17600 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC15.58■□□□□ 0.08
SYN1P17600 ACY3-202ENST00000529256 933 ntTSL 3 BASIC15.58■□□□□ 0.08
SYN1P17600 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC15.58■□□□□ 0.08
SYN1P17600 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC15.58■□□□□ 0.08
SYN1P17600 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC15.58■□□□□ 0.08
SYN1P17600 AL009176.1-201ENST00000607876 650 ntBASIC15.58■□□□□ 0.08
SYN1P17600 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC15.58■□□□□ 0.08
SYN1P17600 AC090386.2-201ENST00000623010 1039 ntBASIC15.58■□□□□ 0.08
SYN1P17600 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYN1P17600 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SYN1P17600 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms