Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
COL6A2P12110 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
COL6A2P12110 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
COL6A2P12110 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL6A2P12110 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.44□□□□□ -0.1
COL6A2P12110 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.43□□□□□ -0.1
COL6A2P12110 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
COL6A2P12110 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.43□□□□□ -0.1
COL6A2P12110 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.43□□□□□ -0.1
COL6A2P12110 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.43□□□□□ -0.1
COL6A2P12110 AC015909.5-201ENST00000624336 2266 ntBASIC14.43□□□□□ -0.1
COL6A2P12110 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 AL022313.4-201ENST00000562756 2046 ntBASIC14.43□□□□□ -0.1
COL6A2P12110 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
COL6A2P12110 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
COL6A2P12110 GUK1-206ENST00000366723 845 ntTSL 5 BASIC14.43□□□□□ -0.1
COL6A2P12110 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.43□□□□□ -0.1
COL6A2P12110 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.43□□□□□ -0.1
COL6A2P12110 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
COL6A2P12110 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.43□□□□□ -0.1
COL6A2P12110 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
COL6A2P12110 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.43□□□□□ -0.1
COL6A2P12110 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.43□□□□□ -0.1
COL6A2P12110 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
COL6A2P12110 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
COL6A2P12110 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
COL6A2P12110 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
COL6A2P12110 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
COL6A2P12110 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.43□□□□□ -0.1
COL6A2P12110 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
COL6A2P12110 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
COL6A2P12110 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.42□□□□□ -0.1
COL6A2P12110 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.42□□□□□ -0.1
COL6A2P12110 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
COL6A2P12110 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL6A2P12110 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL6A2P12110 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL6A2P12110 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL6A2P12110 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL6A2P12110 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
COL6A2P12110 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL6A2P12110 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL6A2P12110 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
COL6A2P12110 AGAP10P-201ENST00000454844 2418 ntBASIC14.42□□□□□ -0.1
COL6A2P12110 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
COL6A2P12110 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.42□□□□□ -0.1
COL6A2P12110 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL6A2P12110 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL6A2P12110 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.42□□□□□ -0.1
COL6A2P12110 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL6A2P12110 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.42□□□□□ -0.1
COL6A2P12110 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.42□□□□□ -0.1
COL6A2P12110 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
COL6A2P12110 MIR770-201ENST00000390219 98 ntBASIC14.42□□□□□ -0.1
COL6A2P12110 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.42□□□□□ -0.1
COL6A2P12110 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL6A2P12110 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL6A2P12110 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.42□□□□□ -0.1
COL6A2P12110 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.42□□□□□ -0.1
COL6A2P12110 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.42□□□□□ -0.1
COL6A2P12110 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL6A2P12110 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.42□□□□□ -0.1
COL6A2P12110 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.42□□□□□ -0.1
COL6A2P12110 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.42□□□□□ -0.1
COL6A2P12110 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
COL6A2P12110 MIR5189-201ENST00000577370 114 ntBASIC14.42□□□□□ -0.1
COL6A2P12110 KRT18P8-201ENST00000581937 1246 ntBASIC14.42□□□□□ -0.1
COL6A2P12110 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.42□□□□□ -0.1
COL6A2P12110 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
COL6A2P12110 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms