Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 CSF2RBP1-201ENST00000447905 391 ntBASIC15.09■□□□□ 0.01
CD48P09326 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.09■□□□□ 0.01
CD48P09326 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.09■□□□□ 0.01
CD48P09326 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.09■□□□□ 0.01
CD48P09326 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.09■□□□□ 0.01
CD48P09326 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.09■□□□□ 0.01
CD48P09326 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.09■□□□□ 0.01
CD48P09326 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.09■□□□□ 0.01
CD48P09326 MIR4259-201ENST00000584466 101 ntBASIC15.09■□□□□ 0.01
CD48P09326 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.09■□□□□ 0.01
CD48P09326 AGAP10P-201ENST00000454844 2418 ntBASIC15.09■□□□□ 0.01
CD48P09326 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.09■□□□□ 0.01
CD48P09326 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CD48P09326 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.09■□□□□ 0.01
CD48P09326 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.08■□□□□ 0.01
CD48P09326 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.08■□□□□ 0.01
CD48P09326 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CD48P09326 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CD48P09326 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CD48P09326 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
CD48P09326 AC111170.3-201ENST00000624282 2464 ntBASIC15.08■□□□□ 0.01
CD48P09326 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
CD48P09326 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.08■□□□□ 0.01
CD48P09326 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CD48P09326 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.08■□□□□ 0.01
CD48P09326 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CD48P09326 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CD48P09326 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.08■□□□□ 0
CD48P09326 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.08■□□□□ 0
CD48P09326 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.08■□□□□ 0
CD48P09326 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
CD48P09326 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD48P09326 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD48P09326 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CD48P09326 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD48P09326 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD48P09326 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD48P09326 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.08■□□□□ 0
CD48P09326 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.08■□□□□ 0
CD48P09326 AL157407.1-201ENST00000435784 904 ntBASIC15.08■□□□□ 0
CD48P09326 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CD48P09326 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD48P09326 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CD48P09326 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.08■□□□□ 0
CD48P09326 AC079316.1-201ENST00000548397 411 ntBASIC15.08■□□□□ 0
CD48P09326 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.08■□□□□ 0
CD48P09326 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.08■□□□□ 0
CD48P09326 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.08■□□□□ 0
CD48P09326 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD48P09326 MIR6720-201ENST00000611664 98 ntBASIC15.08■□□□□ 0
CD48P09326 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
CD48P09326 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CD48P09326 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD48P09326 TUBB8P4-201ENST00000511806 1324 ntBASIC15.08■□□□□ 0
CD48P09326 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD48P09326 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD48P09326 AL359881.3-201ENST00000602640 1721 ntBASIC15.08■□□□□ 0
CD48P09326 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CD48P09326 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.08■□□□□ 0
CD48P09326 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD48P09326 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.08■□□□□ 0
CD48P09326 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.08■□□□□ 0
CD48P09326 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.08■□□□□ 0
CD48P09326 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CD48P09326 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CD48P09326 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CD48P09326 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CD48P09326 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.07■□□□□ 0
CD48P09326 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CD48P09326 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CD48P09326 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CD48P09326 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.07■□□□□ 0
CD48P09326 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.07■□□□□ 0
CD48P09326 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.07■□□□□ 0
CD48P09326 AC022210.1-201ENST00000449856 793 ntBASIC15.07■□□□□ 0
CD48P09326 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.07■□□□□ 0
CD48P09326 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC15.07■□□□□ 0
CD48P09326 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CD48P09326 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD48P09326 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.07■□□□□ 0
CD48P09326 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.07■□□□□ 0
CD48P09326 AC130686.1-201ENST00000622936 2466 ntBASIC15.07■□□□□ 0
CD48P09326 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CD48P09326 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms