Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TPM3P06753 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TPM3P06753 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.42■□□□□ 0.22
TPM3P06753 AC093813.1-201ENST00000605066 256 ntBASIC16.42■□□□□ 0.22
TPM3P06753 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TPM3P06753 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TPM3P06753 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
TPM3P06753 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC16.42■□□□□ 0.22
TPM3P06753 OS9-206ENST00000435406 2346 ntTSL 2 BASIC16.42■□□□□ 0.22
TPM3P06753 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
TPM3P06753 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC16.42■□□□□ 0.22
TPM3P06753 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.42■□□□□ 0.22
TPM3P06753 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 AC135782.3-201ENST00000562782 2105 ntBASIC16.42■□□□□ 0.22
TPM3P06753 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TPM3P06753 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TPM3P06753 BTBD7P1-201ENST00000447253 1453 ntBASIC16.42■□□□□ 0.22
TPM3P06753 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM3P06753 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
TPM3P06753 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM3P06753 RHPN1-AS1-201ENST00000518049 1918 ntBASIC16.41■□□□□ 0.22
TPM3P06753 AL136172.1-201ENST00000598590 1394 ntBASIC16.41■□□□□ 0.22
TPM3P06753 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM3P06753 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM3P06753 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM3P06753 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM3P06753 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM3P06753 DLX4-206ENST00000611342 1662 ntBASIC16.41■□□□□ 0.22
TPM3P06753 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM3P06753 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TPM3P06753 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM3P06753 AL139400.1-201ENST00000366220 510 ntBASIC16.41■□□□□ 0.22
TPM3P06753 AC136604.1-202ENST00000425471 771 ntBASIC16.41■□□□□ 0.22
TPM3P06753 AC007969.1-201ENST00000433675 447 ntBASIC16.41■□□□□ 0.22
TPM3P06753 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.41■□□□□ 0.22
TPM3P06753 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM3P06753 DUX4L47-201ENST00000566374 394 ntBASIC16.41■□□□□ 0.22
TPM3P06753 BX539320.1-201ENST00000623759 877 ntBASIC16.41■□□□□ 0.22
TPM3P06753 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.41■□□□□ 0.22
TPM3P06753 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM3P06753 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TPM3P06753 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TPM3P06753 CSPG4P11-201ENST00000560634 4910 ntBASIC16.41■□□□□ 0.22
TPM3P06753 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM3P06753 CBLB-204ENST00000405772 3237 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM3P06753 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TPM3P06753 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TPM3P06753 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM3P06753 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC16.41■□□□□ 0.22
TPM3P06753 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TPM3P06753 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.4■□□□□ 0.22
TPM3P06753 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TPM3P06753 POM121L14P-201ENST00000406100 1558 ntBASIC16.4■□□□□ 0.22
TPM3P06753 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TPM3P06753 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.4■□□□□ 0.22
TPM3P06753 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.4■□□□□ 0.22
TPM3P06753 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TPM3P06753 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 AL139094.1-201ENST00000405549 1188 ntBASIC16.4■□□□□ 0.22
TPM3P06753 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.4■□□□□ 0.22
TPM3P06753 CNN2P11-201ENST00000429351 262 ntBASIC16.4■□□□□ 0.22
TPM3P06753 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.4■□□□□ 0.22
TPM3P06753 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.4■□□□□ 0.22
TPM3P06753 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.4■□□□□ 0.22
TPM3P06753 AC022616.1-201ENST00000518688 554 ntBASIC16.4■□□□□ 0.22
TPM3P06753 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.4■□□□□ 0.22
TPM3P06753 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.4■□□□□ 0.22
TPM3P06753 AC092865.5-201ENST00000545435 363 ntBASIC16.4■□□□□ 0.22
TPM3P06753 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.4■□□□□ 0.22
TPM3P06753 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.4■□□□□ 0.22
TPM3P06753 AL121894.2-201ENST00000602977 491 ntBASIC16.4■□□□□ 0.22
TPM3P06753 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.4■□□□□ 0.22
TPM3P06753 PRSS30P-206ENST00000641773 873 ntBASIC16.4■□□□□ 0.22
TPM3P06753 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TPM3P06753 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.4■□□□□ 0.22
TPM3P06753 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TPM3P06753 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms