Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.07■□□□□ 0.32
HLA-DOAP06340 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HLA-DOAP06340 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DOAP06340 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DOAP06340 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DOAP06340 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DOAP06340 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 AL512430.1-201ENST00000392575 860 ntBASIC17.07■□□□□ 0.32
HLA-DOAP06340 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DOAP06340 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC17.07■□□□□ 0.32
HLA-DOAP06340 DNAJB1P1-201ENST00000429417 1024 ntBASIC17.07■□□□□ 0.32
HLA-DOAP06340 CHCHD2P9-201ENST00000461726 456 ntBASIC17.07■□□□□ 0.32
HLA-DOAP06340 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HLA-DOAP06340 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 AC138894.2-201ENST00000602838 371 ntBASIC17.07■□□□□ 0.32
HLA-DOAP06340 MIR7845-201ENST00000618396 99 ntBASIC17.07■□□□□ 0.32
HLA-DOAP06340 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
HLA-DOAP06340 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
HLA-DOAP06340 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
HLA-DOAP06340 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.07■□□□□ 0.32
HLA-DOAP06340 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HLA-DOAP06340 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HLA-DOAP06340 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
HLA-DOAP06340 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC17.06■□□□□ 0.32
HLA-DOAP06340 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DOAP06340 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DOAP06340 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC17.06■□□□□ 0.32
HLA-DOAP06340 FTH1P22-201ENST00000456305 520 ntBASIC17.06■□□□□ 0.32
HLA-DOAP06340 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC17.06■□□□□ 0.32
HLA-DOAP06340 FOS-204ENST00000554617 796 ntTSL 2 BASIC17.06■□□□□ 0.32
HLA-DOAP06340 MIR5572-201ENST00000583188 137 ntBASIC17.06■□□□□ 0.32
HLA-DOAP06340 WDR7-208ENST00000589935 544 ntTSL 4 BASIC17.06■□□□□ 0.32
HLA-DOAP06340 AC092171.5-201ENST00000608012 942 ntBASIC17.06■□□□□ 0.32
HLA-DOAP06340 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.06■□□□□ 0.32
HLA-DOAP06340 AC242376.2-201ENST00000619355 883 ntBASIC17.06■□□□□ 0.32
HLA-DOAP06340 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.06■□□□□ 0.32
HLA-DOAP06340 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
HLA-DOAP06340 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HLA-DOAP06340 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
HLA-DOAP06340 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 AL627422.1-201ENST00000434104 580 ntBASIC17.05■□□□□ 0.32
HLA-DOAP06340 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HLA-DOAP06340 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 AP002803.1-201ENST00000528836 498 ntBASIC17.05■□□□□ 0.32
HLA-DOAP06340 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.05■□□□□ 0.32
HLA-DOAP06340 MIR4522-201ENST00000584932 87 ntBASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms