Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13□□□□□ -0.33
APOC1P02654 SPCS2P1-201ENST00000561636 679 ntBASIC13□□□□□ -0.33
APOC1P02654 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13□□□□□ -0.33
APOC1P02654 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13□□□□□ -0.33
APOC1P02654 RN7SL204P-201ENST00000582831 262 ntBASIC13□□□□□ -0.33
APOC1P02654 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13□□□□□ -0.33
APOC1P02654 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
APOC1P02654 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13□□□□□ -0.33
APOC1P02654 WFDC1-204ENST00000613603 549 ntBASIC13□□□□□ -0.33
APOC1P02654 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13□□□□□ -0.33
APOC1P02654 ABBA01031660.1-201ENST00000635219 756 ntBASIC13□□□□□ -0.33
APOC1P02654 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
APOC1P02654 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
APOC1P02654 AP001267.2-201ENST00000532619 2086 ntBASIC13□□□□□ -0.33
APOC1P02654 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13□□□□□ -0.33
APOC1P02654 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
APOC1P02654 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
APOC1P02654 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
APOC1P02654 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 AC073957.3-201ENST00000609998 6758 ntBASIC12.99□□□□□ -0.33
APOC1P02654 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
APOC1P02654 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.99□□□□□ -0.33
APOC1P02654 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
APOC1P02654 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
APOC1P02654 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC1P02654 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
APOC1P02654 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
APOC1P02654 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC1P02654 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
APOC1P02654 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.99□□□□□ -0.33
APOC1P02654 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
APOC1P02654 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
APOC1P02654 BAATP1-201ENST00000412284 1225 ntBASIC12.99□□□□□ -0.33
APOC1P02654 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.99□□□□□ -0.33
APOC1P02654 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC1P02654 ACTG1P3-201ENST00000431775 1114 ntBASIC12.99□□□□□ -0.33
APOC1P02654 AC002472.2-201ENST00000442739 958 ntBASIC12.99□□□□□ -0.33
APOC1P02654 BCRP1-201ENST00000444246 691 ntBASIC12.99□□□□□ -0.33
APOC1P02654 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC1P02654 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC1P02654 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC1P02654 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
APOC1P02654 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.99□□□□□ -0.33
APOC1P02654 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
APOC1P02654 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
APOC1P02654 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC12.99□□□□□ -0.33
APOC1P02654 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.99□□□□□ -0.33
APOC1P02654 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC12.99□□□□□ -0.33
APOC1P02654 TP53TG3HP-202ENST00000569755 579 ntBASIC12.99□□□□□ -0.33
APOC1P02654 CTBP2P3-201ENST00000585629 1255 ntBASIC12.99□□□□□ -0.33
APOC1P02654 AC027307.3-201ENST00000594262 1100 ntBASIC12.99□□□□□ -0.33
APOC1P02654 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
APOC1P02654 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 AC152010.1-201ENST00000415779 2006 ntBASIC12.99□□□□□ -0.33
APOC1P02654 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC1P02654 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 POM121L4P-202ENST00000427789 1891 ntBASIC12.99□□□□□ -0.33
APOC1P02654 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC1P02654 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC1P02654 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC12.99□□□□□ -0.33
APOC1P02654 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
APOC1P02654 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC12.99□□□□□ -0.33
APOC1P02654 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.98□□□□□ -0.33
APOC1P02654 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
APOC1P02654 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms