Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC28A1O00337 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC28A1O00337 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC28A1O00337 OR10B1P-201ENST00000601666 907 ntBASIC14.07□□□□□ -0.16
SLC28A1O00337 ECM1P1-201ENST00000604092 1279 ntBASIC14.07□□□□□ -0.16
SLC28A1O00337 AL354718.3-201ENST00000616414 581 ntBASIC14.07□□□□□ -0.16
SLC28A1O00337 CR382287.1-201ENST00000623954 586 ntBASIC14.07□□□□□ -0.16
SLC28A1O00337 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC28A1O00337 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.07□□□□□ -0.16
SLC28A1O00337 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC14.07□□□□□ -0.16
SLC28A1O00337 AC023794.5-201ENST00000564380 2157 ntBASIC14.07□□□□□ -0.16
SLC28A1O00337 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SLC28A1O00337 AC130686.1-201ENST00000622936 2466 ntBASIC14.07□□□□□ -0.16
SLC28A1O00337 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC28A1O00337 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC28A1O00337 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SLC28A1O00337 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC28A1O00337 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SLC28A1O00337 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC28A1O00337 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC28A1O00337 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC28A1O00337 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.07□□□□□ -0.16
SLC28A1O00337 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC28A1O00337 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SLC28A1O00337 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.07□□□□□ -0.16
SLC28A1O00337 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.07□□□□□ -0.16
SLC28A1O00337 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC28A1O00337 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
SLC28A1O00337 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC28A1O00337 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
SLC28A1O00337 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SLC28A1O00337 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC28A1O00337 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SLC28A1O00337 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SLC28A1O00337 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SLC28A1O00337 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SLC28A1O00337 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC28A1O00337 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
SLC28A1O00337 AC005229.1-201ENST00000392885 409 ntBASIC14.06□□□□□ -0.16
SLC28A1O00337 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
SLC28A1O00337 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC28A1O00337 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.06□□□□□ -0.16
SLC28A1O00337 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
SLC28A1O00337 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.06□□□□□ -0.16
SLC28A1O00337 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
SLC28A1O00337 GNRHR2-203ENST00000581100 1187 ntBASIC14.06□□□□□ -0.16
SLC28A1O00337 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.06□□□□□ -0.16
SLC28A1O00337 AC008825.2-201ENST00000603374 718 ntBASIC14.06□□□□□ -0.16
SLC28A1O00337 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC14.06□□□□□ -0.16
SLC28A1O00337 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC28A1O00337 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC28A1O00337 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SLC28A1O00337 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
SLC28A1O00337 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC28A1O00337 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC28A1O00337 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
SLC28A1O00337 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.06□□□□□ -0.16
SLC28A1O00337 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
SLC28A1O00337 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
SLC28A1O00337 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC28A1O00337 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SLC28A1O00337 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
SLC28A1O00337 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
SLC28A1O00337 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
SLC28A1O00337 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 AC098614.1-201ENST00000368528 745 ntBASIC14.05□□□□□ -0.16
SLC28A1O00337 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.05□□□□□ -0.16
SLC28A1O00337 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SLC28A1O00337 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC28A1O00337 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.05□□□□□ -0.16
SLC28A1O00337 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC14.05□□□□□ -0.16
SLC28A1O00337 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.05□□□□□ -0.16
SLC28A1O00337 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms