Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
LOC285556D6RIA3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 POLR3G-207ENST00000514483 682 ntTSL 3 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 MIAT_exon5_3.1-201ENST00000613656 377 ntBASIC16.1■□□□□ 0.17
LOC285556D6RIA3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 UROS-201ENST00000368774 744 ntTSL 2 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 PPM1N-203ENST00000396737 872 ntTSL 2 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 AC136604.1-202ENST00000425471 771 ntBASIC16.1■□□□□ 0.17
LOC285556D6RIA3 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 AC079250.1-201ENST00000456046 531 ntBASIC16.1■□□□□ 0.17
LOC285556D6RIA3 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 AC026120.2-201ENST00000617239 309 ntBASIC16.1■□□□□ 0.17
LOC285556D6RIA3 IDH3A-224ENST00000629769 114 ntTSL 5 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LOC285556D6RIA3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 AC020910.6-201ENST00000623084 1459 ntBASIC16.09■□□□□ 0.17
LOC285556D6RIA3 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 DDC-204ENST00000426377 1700 ntTSL 3 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 SIRPB3P-201ENST00000340424 1216 ntBASIC16.09■□□□□ 0.17
LOC285556D6RIA3 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 SNORA57-201ENST00000383870 149 ntBASIC16.09■□□□□ 0.17
LOC285556D6RIA3 AC092570.1-201ENST00000414446 469 ntBASIC16.09■□□□□ 0.17
LOC285556D6RIA3 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 AL121983.2-202ENST00000419983 535 ntTSL 3 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 AC104961.1-201ENST00000427605 771 ntBASIC16.09■□□□□ 0.17
LOC285556D6RIA3 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 NAV1-210ENST00000593583 726 ntBASIC16.09■□□□□ 0.17
LOC285556D6RIA3 AL591424.3-201ENST00000614278 872 ntBASIC16.09■□□□□ 0.17
LOC285556D6RIA3 AC073869.4-201ENST00000620841 800 ntBASIC16.09■□□□□ 0.17
LOC285556D6RIA3 GARS-210ENST00000627489 324 ntTSL 4 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 AL139424.3-202ENST00000641619 917 ntBASIC16.09■□□□□ 0.17
LOC285556D6RIA3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
LOC285556D6RIA3 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms