Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.51■□□□□ 0.23
TMEM88BA6NKF7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 CCL19-202ENST00000378800 414 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 MIR632-201ENST00000385193 94 ntBASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 RPL10-203ENST00000406022 748 ntTSL 3 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 CCND3P1-201ENST00000438347 580 ntBASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 MAX-218ENST00000557746 571 ntTSL 4 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 CDC37P2-201ENST00000562287 1029 ntBASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 AC022001.3-201ENST00000606330 596 ntBASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 PRAL-201ENST00000624952 3286 ntBASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 TBC1D27-202ENST00000424239 1573 ntBASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.5■□□□□ 0.23
TMEM88BA6NKF7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 AC092810.2-201ENST00000431570 362 ntBASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 MARK2P17-201ENST00000498560 841 ntBASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 STAU2-212ENST00000521419 972 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 AP003031.2-205ENST00000531263 683 ntTSL 2 BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 AC005586.2-201ENST00000563946 837 ntBASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 AC007728.1-202ENST00000564510 787 ntTSL 3 BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 RN7SL300P-201ENST00000582522 318 ntBASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 CCT8L1P-201ENST00000465400 1674 ntBASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TMEM88BA6NKF7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms