Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 AC004923.1-202ENST00000642106 209 ntBASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL4A3BPQ9Y5P4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 AC009093.10-201ENST00000641956 1442 ntBASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 KRT8P28-201ENST00000433288 1390 ntBASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 AC016700.1-201ENST00000429424 312 ntBASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 HIST2H2BC-201ENST00000498492 580 ntBASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 RN7SL163P-201ENST00000583100 276 ntBASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL4A3BPQ9Y5P4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 AL008718.2-201ENST00000609206 1313 ntBASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 AC012441.2-201ENST00000444843 739 ntBASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 RPL18P13-201ENST00000478088 569 ntBASIC16.29■□□□□ 0.2
COL4A3BPQ9Y5P4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms