Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 AC007326.2-201ENST00000624224 7579 ntBASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 AC139749.1-202ENST00000617529 3139 ntBASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 AL035414.1-201ENST00000451327 857 ntBASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 SPCS2P2-201ENST00000603270 608 ntBASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 RN7SL832P-201ENST00000607781 1756 ntBASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
PCDHB1Q9Y5F3 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 AC215219.1-201ENST00000400706 1817 ntBASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 GRK6P1-201ENST00000400595 1711 ntBASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 MIR33B-201ENST00000385104 96 ntBASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 HIST2H2BB-201ENST00000449108 381 ntBASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 AC091544.8-201ENST00000619490 361 ntBASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHB1Q9Y5F3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.58□□□□□ -0.07
PCDHB1Q9Y5F3 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHB1Q9Y5F3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHB1Q9Y5F3 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms