Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 AL354702.1-201ENST00000442006 1960 ntBASIC19.44■□□□□ 0.7
PHF8Q9UPP1 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 KRT8P43-201ENST00000406052 1458 ntBASIC19.44■□□□□ 0.7
PHF8Q9UPP1 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 KRT18P62-201ENST00000446618 1287 ntBASIC19.44■□□□□ 0.7
PHF8Q9UPP1 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 AC100858.1-201ENST00000514059 1228 ntBASIC19.44■□□□□ 0.7
PHF8Q9UPP1 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 NAV1-210ENST00000593583 726 ntBASIC19.44■□□□□ 0.7
PHF8Q9UPP1 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 PLS3-210ENST00000626746 216 ntTSL 4 BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 CASP16P-204ENST00000635032 809 ntBASIC19.44■□□□□ 0.7
PHF8Q9UPP1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PHF8Q9UPP1 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 CICP6-201ENST00000457191 2729 ntBASIC19.43■□□□□ 0.7
PHF8Q9UPP1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 RPL3P2-204ENST00000413027 1203 ntBASIC19.43■□□□□ 0.7
PHF8Q9UPP1 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 AL512599.1-201ENST00000430724 685 ntBASIC19.43■□□□□ 0.7
PHF8Q9UPP1 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 TP53-221ENST00000615910 1149 ntTSL 5 BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 AC018529.2-202ENST00000611482 3087 ntBASIC19.43■□□□□ 0.7
PHF8Q9UPP1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 AGAP7P-201ENST00000582299 2062 ntBASIC19.43■□□□□ 0.7
PHF8Q9UPP1 AGAP14-201ENST00000624701 2060 ntBASIC19.43■□□□□ 0.7
PHF8Q9UPP1 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
PHF8Q9UPP1 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 AC007950.2-201ENST00000615045 2347 ntBASIC19.42■□□□□ 0.7
PHF8Q9UPP1 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 VCX3A-202ENST00000398729 808 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 AF274858.1-201ENST00000406288 372 ntBASIC19.42■□□□□ 0.7
PHF8Q9UPP1 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 NME6-208ENST00000435684 599 ntTSL 2 BASIC19.42■□□□□ 0.7
PHF8Q9UPP1 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms