Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SLC52A1Q9NWF4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC20.38■□□□□ 0.85
SLC52A1Q9NWF4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC52A1Q9NWF4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC20.38■□□□□ 0.85
SLC52A1Q9NWF4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 SSR4-202ENST00000370085 526 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 AL357373.1-201ENST00000394974 322 ntBASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 HNRNPA1P58-201ENST00000403629 610 ntBASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 AP000244.1-201ENST00000424582 201 ntBASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 AL512599.1-201ENST00000430724 685 ntBASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 CASP3-205ENST00000517513 964 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 KNOP1P1-201ENST00000542108 989 ntBASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 AC073869.4-201ENST00000620841 800 ntBASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SLC52A1Q9NWF4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 ABCD1P4-201ENST00000399687 604 ntBASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 LINP1-201ENST00000417112 917 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 NAV1-210ENST00000593583 726 ntBASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SLC52A1Q9NWF4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 PIFO-201ENST00000369737 746 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 RN7SL147P-201ENST00000487345 298 ntBASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC20.35■□□□□ 0.85
SLC52A1Q9NWF4 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms