Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 AC007389.4-201ENST00000454674 793 ntBASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 TMEM198B-204ENST00000484016 896 ntBASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 AP001582.1-201ENST00000525856 295 ntBASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 PRSS30P-206ENST00000641773 873 ntBASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
LIN7CQ9NUP9 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LIN7CQ9NUP9 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.21□□□□□ -0.46
LIN7CQ9NUP9 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
LIN7CQ9NUP9 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
LIN7CQ9NUP9 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LIN7CQ9NUP9 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LIN7CQ9NUP9 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
LIN7CQ9NUP9 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
LIN7CQ9NUP9 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LIN7CQ9NUP9 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
LIN7CQ9NUP9 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
LIN7CQ9NUP9 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.21□□□□□ -0.46
LIN7CQ9NUP9 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
LIN7CQ9NUP9 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 NME2P1-201ENST00000426182 414 ntBASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 INE1-201ENST00000456273 945 ntBASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 AC015936.2-201ENST00000593177 259 ntBASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 AC010319.3-201ENST00000597028 470 ntBASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 AC012617.1-204ENST00000586340 2305 ntBASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 AC005252.3-201ENST00000623855 2258 ntBASIC12.2□□□□□ -0.46
LIN7CQ9NUP9 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
LIN7CQ9NUP9 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms