Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 RPS15-207ENST00000591032 550 ntTSL 3 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 RPS15-212ENST00000593052 629 ntTSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 AL353801.3-201ENST00000609898 542 ntBASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 AC009154.2-201ENST00000621177 724 ntBASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 AL590326.2-201ENST00000625139 305 ntBASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 GOLGA2-201ENST00000421699 4260 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 GPALPP1-202ENST00000361121 3410 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 NOL10-205ENST00000538384 3418 ntTSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 AC009336.1-201ENST00000608941 1553 ntBASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 TYRO3-202ENST00000559066 3876 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 ARMC1-201ENST00000276569 3032 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 PRAMEF9-201ENST00000415919 1863 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 SATB2-AS1-205ENST00000450728 3314 ntTSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 ALDH7A1-228ENST00000636886 2321 ntTSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 RYR1-201ENST00000355481 15377 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 PLEC-205ENST00000356346 14683 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 TMEM178B-202ENST00000565468 10558 ntAPPRIS P2 TSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 TMEM178B-203ENST00000610315 10552 ntAPPRIS ALT1 TSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 GPR132-201ENST00000329797 3660 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 PRKAR1A-217ENST00000589228 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 EPS15L1-203ENST00000535753 2666 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 SYT2-201ENST00000367267 7614 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
CDC42SE1Q9NRR8 EPB41L2-232ENST00000628542 4247 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 ASIC1-208ENST00000552438 3327 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 SEC14L1-212ENST00000585618 2712 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 LINC02069-201ENST00000457449 2591 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 SERPINA3-204ENST00000482740 2420 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 KIR3DL1-201ENST00000326542 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 C1QTNF9B-202ENST00000382140 1825 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 KCNAB2-204ENST00000378083 4142 ntTSL 2 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 CHMP1B-201ENST00000526991 3054 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 ADAMTSL1-201ENST00000276935 2906 ntTSL 5 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 HNRNPF-203ENST00000357065 2617 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 SLC27A6-202ENST00000395266 2616 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 MPP4-201ENST00000315506 2330 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 MPP4-207ENST00000428900 2320 ntTSL 2 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 TMEM33-203ENST00000504986 7482 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 CWC22-202ENST00000410053 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 ACAN-201ENST00000352105 7526 ntTSL 5 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 CDK6-201ENST00000265734 11612 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 QRICH2-201ENST00000262765 5357 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 USP1-201ENST00000339950 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 SSR4P1-201ENST00000415143 412 ntBASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 MIR4767-201ENST00000582827 78 ntBASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 AP001462.1-201ENST00000594089 452 ntBASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 AL121829.2-201ENST00000620908 328 ntBASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 DDC-201ENST00000357936 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 AL133216.2-201ENST00000622550 7213 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 PREX2-201ENST00000288368 10750 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 SIM1-202ENST00000369208 8430 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 SPDYE8P-201ENST00000333385 2281 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 SPDYE11-201ENST00000340073 2281 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 TSEN2-204ENST00000415684 2279 ntTSL 5 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 SPDYE9P-203ENST00000575125 2281 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 WDR6-220ENST00000608424 4070 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 ZFAT-201ENST00000377838 4597 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
CDC42SE1Q9NRR8 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms