Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VAT1LQ9HCJ6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAT1LQ9HCJ6 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VAT1LQ9HCJ6 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAT1LQ9HCJ6 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.9■□□□□ 0.3
VAT1LQ9HCJ6 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.9■□□□□ 0.3
VAT1LQ9HCJ6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAT1LQ9HCJ6 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VAT1LQ9HCJ6 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VAT1LQ9HCJ6 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VAT1LQ9HCJ6 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
VAT1LQ9HCJ6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VAT1LQ9HCJ6 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
VAT1LQ9HCJ6 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VAT1LQ9HCJ6 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
VAT1LQ9HCJ6 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 AL390755.1-201ENST00000623716 2027 ntBASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 RN7SKP214-201ENST00000364208 315 ntBASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 RN7SL11P-201ENST00000471305 293 ntBASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 RCC2P8-201ENST00000502779 1035 ntBASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 KLK3-207ENST00000595952 969 ntTSL 3 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 AL132994.2-201ENST00000603120 687 ntBASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 AP000346.4-201ENST00000614827 381 ntBASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VAT1LQ9HCJ6 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 AL157791.1-201ENST00000553667 1699 ntBASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 MIR769-201ENST00000390225 118 ntBASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 SLC25A24P2-201ENST00000415059 510 ntBASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 Z97180.1-201ENST00000445173 988 ntBASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 AL021578.1-201ENST00000613646 709 ntBASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VAT1LQ9HCJ6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms