Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 DDX39AP1-201ENST00000445147 1181 ntBASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 AC025186.1-201ENST00000478174 870 ntBASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 PRSS3P1-201ENST00000503996 742 ntBASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 RPS23-207ENST00000511844 530 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 FOXN3-AS2-201ENST00000554071 1262 ntBASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 AL132994.1-201ENST00000554098 400 ntBASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 NT5C-204ENST00000578337 582 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDH11XQ9BZA7 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 TMEM242-201ENST00000367144 1030 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 FAU-202ENST00000434372 533 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 RN7SKP155-201ENST00000516031 288 ntBASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 TCAF2P1-201ENST00000291129 2421 ntBASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 KRT8P43-201ENST00000406052 1458 ntBASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
PCDH11XQ9BZA7 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 OR7E115P-201ENST00000382617 1024 ntBASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 RPL3P2-204ENST00000413027 1203 ntBASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 AC022447.6-201ENST00000515522 438 ntBASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 AL512310.5-201ENST00000551999 515 ntBASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 AP005212.2-201ENST00000584979 510 ntBASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 AC007952.5-201ENST00000572818 1486 ntBASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
PCDH11XQ9BZA7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms