Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SSBP4Q9BWG4 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
SSBP4Q9BWG4 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC11.16□□□□□ -0.62
SSBP4Q9BWG4 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SSBP4Q9BWG4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.16□□□□□ -0.62
SSBP4Q9BWG4 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
SSBP4Q9BWG4 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
SSBP4Q9BWG4 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 AL360270.3-201ENST00000609118 1348 ntBASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 AC013470.3-201ENST00000420252 1194 ntBASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 KRT18P64-201ENST00000434946 1219 ntBASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 RPL13P2-201ENST00000440687 659 ntBASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 SAMD11P1-201ENST00000571429 661 ntBASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 AC025048.3-201ENST00000590609 569 ntBASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 AC005014.3-201ENST00000605985 190 ntBASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 AC005702.4-201ENST00000618393 416 ntBASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 C20orf181-201ENST00000623918 480 ntBASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 OR10R2-202ENST00000641067 1132 ntAPPRIS ALT2 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
SSBP4Q9BWG4 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SSBP4Q9BWG4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SSBP4Q9BWG4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
SSBP4Q9BWG4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC11.15□□□□□ -0.63
SSBP4Q9BWG4 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SSBP4Q9BWG4 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC11.15□□□□□ -0.63
SSBP4Q9BWG4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
SSBP4Q9BWG4 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
SSBP4Q9BWG4 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
SSBP4Q9BWG4 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms