Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 KRT18P25-201ENST00000508931 1278 ntBASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 CHCHD2P3-201ENST00000603038 451 ntBASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 AC138696.2-201ENST00000607376 223 ntBASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 AC015909.5-201ENST00000624336 2266 ntBASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 AC072061.1-201ENST00000569710 2234 ntBASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC12.37□□□□□ -0.43
HDHD3Q9BSH5 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 RAC2-204ENST00000406508 893 ntTSL 5 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 SPTLC1P1-201ENST00000447199 261 ntBASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 SORD2P-201ENST00000558556 1069 ntBASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 AL132655.2-201ENST00000596276 594 ntBASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 MSTO2P-201ENST00000314835 1709 ntBASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
HDHD3Q9BSH5 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms