Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
COL12A1Q99715 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL12A1Q99715 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL12A1Q99715 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL12A1Q99715 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL12A1Q99715 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL12A1Q99715 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC12.38□□□□□ -0.43
COL12A1Q99715 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
COL12A1Q99715 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL12A1Q99715 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL12A1Q99715 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL12A1Q99715 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL12A1Q99715 AC103563.1-201ENST00000429316 123 ntBASIC12.38□□□□□ -0.43
COL12A1Q99715 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC12.38□□□□□ -0.43
COL12A1Q99715 RN7SL838P-201ENST00000481676 295 ntBASIC12.38□□□□□ -0.43
COL12A1Q99715 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC12.38□□□□□ -0.43
COL12A1Q99715 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC12.38□□□□□ -0.43
COL12A1Q99715 AC016590.1-201ENST00000588763 420 ntTSL 2 BASIC12.38□□□□□ -0.43
COL12A1Q99715 AL021707.6-201ENST00000609212 491 ntBASIC12.38□□□□□ -0.43
COL12A1Q99715 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.38□□□□□ -0.43
COL12A1Q99715 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL12A1Q99715 MIR6819-201ENST00000622122 61 ntBASIC12.38□□□□□ -0.43
COL12A1Q99715 AC126755.5-201ENST00000622756 267 ntBASIC12.38□□□□□ -0.43
COL12A1Q99715 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC12.38□□□□□ -0.43
COL12A1Q99715 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL12A1Q99715 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
COL12A1Q99715 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL12A1Q99715 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
COL12A1Q99715 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL12A1Q99715 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
COL12A1Q99715 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
COL12A1Q99715 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
COL12A1Q99715 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC12.37□□□□□ -0.43
COL12A1Q99715 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC12.37□□□□□ -0.43
COL12A1Q99715 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC12.37□□□□□ -0.43
COL12A1Q99715 AC000078.1-201ENST00000420617 682 ntBASIC12.37□□□□□ -0.43
COL12A1Q99715 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 AC005740.1-201ENST00000515639 522 ntBASIC12.37□□□□□ -0.43
COL12A1Q99715 AACSP1-202ENST00000521412 1095 ntBASIC12.37□□□□□ -0.43
COL12A1Q99715 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC12.37□□□□□ -0.43
COL12A1Q99715 MIR4459-201ENST00000581837 66 ntBASIC12.37□□□□□ -0.43
COL12A1Q99715 RN7SL556P-201ENST00000582856 298 ntBASIC12.37□□□□□ -0.43
COL12A1Q99715 PAX6-247ENST00000638965 979 ntTSL 5 BASIC12.37□□□□□ -0.43
COL12A1Q99715 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 AC009093.10-201ENST00000641956 1442 ntBASIC12.37□□□□□ -0.43
COL12A1Q99715 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
COL12A1Q99715 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC12.37□□□□□ -0.43
COL12A1Q99715 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.37□□□□□ -0.43
COL12A1Q99715 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC12.37□□□□□ -0.43
COL12A1Q99715 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 ASS1P1-201ENST00000402854 1237 ntBASIC12.37□□□□□ -0.43
COL12A1Q99715 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
COL12A1Q99715 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC12.37□□□□□ -0.43
COL12A1Q99715 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC12.37□□□□□ -0.43
COL12A1Q99715 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC12.37□□□□□ -0.43
COL12A1Q99715 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC12.37□□□□□ -0.43
COL12A1Q99715 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC12.37□□□□□ -0.43
COL12A1Q99715 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC12.37□□□□□ -0.43
COL12A1Q99715 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC12.37□□□□□ -0.43
COL12A1Q99715 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.37□□□□□ -0.43
COL12A1Q99715 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.37□□□□□ -0.43
COL12A1Q99715 AGK-211ENST00000629555 2765 ntTSL 5 BASIC12.37□□□□□ -0.43
COL12A1Q99715 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
COL12A1Q99715 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
COL12A1Q99715 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC12.36□□□□□ -0.43
COL12A1Q99715 FAM21EP-201ENST00000417804 985 ntBASIC12.36□□□□□ -0.43
COL12A1Q99715 C3orf84-201ENST00000432035 669 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
COL12A1Q99715 RBM14-205ENST00000443702 732 ntTSL 3 BASIC12.36□□□□□ -0.43
COL12A1Q99715 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC12.36□□□□□ -0.43
COL12A1Q99715 AC112694.1-202ENST00000540985 943 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms