Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL13Q99616 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.25□□□□□ -0.45
CCL13Q99616 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.25□□□□□ -0.45
CCL13Q99616 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CCL13Q99616 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CCL13Q99616 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL13Q99616 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC12.25□□□□□ -0.45
CCL13Q99616 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.24□□□□□ -0.45
CCL13Q99616 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CCL13Q99616 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CCL13Q99616 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.24□□□□□ -0.45
CCL13Q99616 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
CCL13Q99616 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 KLF2P1-201ENST00000447438 1042 ntBASIC12.24□□□□□ -0.45
CCL13Q99616 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 HNRNPA1P36-201ENST00000521313 955 ntBASIC12.24□□□□□ -0.45
CCL13Q99616 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.24□□□□□ -0.45
CCL13Q99616 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
CCL13Q99616 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.24□□□□□ -0.45
CCL13Q99616 AC005695.3-201ENST00000614522 232 ntBASIC12.24□□□□□ -0.45
CCL13Q99616 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC12.24□□□□□ -0.45
CCL13Q99616 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.24□□□□□ -0.45
CCL13Q99616 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL13Q99616 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL13Q99616 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.23□□□□□ -0.45
CCL13Q99616 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.23□□□□□ -0.45
CCL13Q99616 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.23□□□□□ -0.45
CCL13Q99616 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL13Q99616 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.23□□□□□ -0.45
CCL13Q99616 FAM45BP-202ENST00000592932 1624 ntBASIC12.23□□□□□ -0.45
CCL13Q99616 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
CCL13Q99616 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.23□□□□□ -0.45
CCL13Q99616 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
CCL13Q99616 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.23□□□□□ -0.45
CCL13Q99616 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.23□□□□□ -0.45
CCL13Q99616 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
CCL13Q99616 MIR663B-201ENST00000408361 115 ntBASIC12.23□□□□□ -0.45
CCL13Q99616 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC12.23□□□□□ -0.45
CCL13Q99616 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.23□□□□□ -0.45
CCL13Q99616 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.23□□□□□ -0.45
CCL13Q99616 ACTBP11-201ENST00000436287 1126 ntBASIC12.23□□□□□ -0.45
CCL13Q99616 RNMTL1P1-201ENST00000454103 560 ntBASIC12.23□□□□□ -0.45
CCL13Q99616 PFN1P12-201ENST00000455938 534 ntBASIC12.23□□□□□ -0.45
CCL13Q99616 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.23□□□□□ -0.45
CCL13Q99616 CD74-212ENST00000524315 584 ntTSL 5 BASIC12.23□□□□□ -0.45
CCL13Q99616 FAM8A2P-201ENST00000528813 1142 ntBASIC12.23□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms