Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 AC011495.1-201ENST00000498085 584 ntBASIC13.4□□□□□ -0.26
SNX18Q96RF0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 AC092552.1-201ENST00000547243 906 ntBASIC13.4□□□□□ -0.26
SNX18Q96RF0 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 TMEM261P1-201ENST00000604899 340 ntBASIC13.4□□□□□ -0.26
SNX18Q96RF0 AP005019.2-201ENST00000615104 511 ntBASIC13.4□□□□□ -0.26
SNX18Q96RF0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.4□□□□□ -0.26
SNX18Q96RF0 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SNX18Q96RF0 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SNX18Q96RF0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
SNX18Q96RF0 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.4□□□□□ -0.27
SNX18Q96RF0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 RNU1-114P-201ENST00000365297 166 ntBASIC13.39□□□□□ -0.27
SNX18Q96RF0 ACKR1-201ENST00000368121 1240 ntBASIC13.39□□□□□ -0.27
SNX18Q96RF0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 ACTBP8-201ENST00000403258 1108 ntBASIC13.39□□□□□ -0.27
SNX18Q96RF0 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 KLF2P2-201ENST00000416807 1039 ntBASIC13.39□□□□□ -0.27
SNX18Q96RF0 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 AP001582.1-201ENST00000525856 295 ntBASIC13.39□□□□□ -0.27
SNX18Q96RF0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 ENPP7P5-201ENST00000541031 1031 ntBASIC13.39□□□□□ -0.27
SNX18Q96RF0 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
SNX18Q96RF0 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.39□□□□□ -0.27
SNX18Q96RF0 AP001972.5-201ENST00000624624 2338 ntBASIC13.39□□□□□ -0.27
SNX18Q96RF0 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms