Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
COL21A1Q96P44 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL21A1Q96P44 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
COL21A1Q96P44 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
COL21A1Q96P44 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL21A1Q96P44 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.87□□□□□ -0.19
COL21A1Q96P44 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.87□□□□□ -0.19
COL21A1Q96P44 AC131212.3-201ENST00000624087 4219 ntBASIC13.87□□□□□ -0.19
COL21A1Q96P44 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
COL21A1Q96P44 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
COL21A1Q96P44 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL21A1Q96P44 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL21A1Q96P44 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COL21A1Q96P44 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL21A1Q96P44 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
COL21A1Q96P44 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COL21A1Q96P44 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
COL21A1Q96P44 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 CICP8-201ENST00000455800 2813 ntBASIC13.86□□□□□ -0.19
COL21A1Q96P44 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
COL21A1Q96P44 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
COL21A1Q96P44 AL136172.1-201ENST00000598590 1394 ntBASIC13.86□□□□□ -0.19
COL21A1Q96P44 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.86□□□□□ -0.19
COL21A1Q96P44 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 PDIA3P1-201ENST00000471856 1510 ntBASIC13.86□□□□□ -0.19
COL21A1Q96P44 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.86□□□□□ -0.19
COL21A1Q96P44 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
COL21A1Q96P44 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.86□□□□□ -0.19
COL21A1Q96P44 FAM197Y7-201ENST00000432892 766 ntBASIC13.86□□□□□ -0.19
COL21A1Q96P44 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
COL21A1Q96P44 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.86□□□□□ -0.19
COL21A1Q96P44 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.86□□□□□ -0.19
COL21A1Q96P44 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
COL21A1Q96P44 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
COL21A1Q96P44 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
COL21A1Q96P44 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.86□□□□□ -0.19
COL21A1Q96P44 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
COL21A1Q96P44 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 AC003102.2-201ENST00000589195 1469 ntBASIC13.86□□□□□ -0.19
COL21A1Q96P44 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.86□□□□□ -0.19
COL21A1Q96P44 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
COL21A1Q96P44 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 POM121L8P-201ENST00000417732 1281 ntBASIC13.85□□□□□ -0.19
COL21A1Q96P44 ARSEP1-201ENST00000420443 635 ntBASIC13.85□□□□□ -0.19
COL21A1Q96P44 CNN2P8-201ENST00000421872 913 ntBASIC13.85□□□□□ -0.19
COL21A1Q96P44 TLE1P1-201ENST00000422965 589 ntBASIC13.85□□□□□ -0.19
COL21A1Q96P44 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 RPL7P3-201ENST00000441388 714 ntBASIC13.85□□□□□ -0.19
COL21A1Q96P44 POM121L9P-203ENST00000441984 1285 ntBASIC13.85□□□□□ -0.19
COL21A1Q96P44 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 KLF2P4-201ENST00000451959 1225 ntBASIC13.85□□□□□ -0.19
COL21A1Q96P44 ACA64.2-201ENST00000459014 129 ntBASIC13.85□□□□□ -0.19
COL21A1Q96P44 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 AC004466.1-201ENST00000599515 1080 ntBASIC13.85□□□□□ -0.19
COL21A1Q96P44 ECM1P1-201ENST00000604092 1279 ntBASIC13.85□□□□□ -0.19
COL21A1Q96P44 AC138951.2-201ENST00000623455 1161 ntBASIC13.85□□□□□ -0.19
COL21A1Q96P44 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
COL21A1Q96P44 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.85□□□□□ -0.19
COL21A1Q96P44 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms