Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 LINC00388-201ENST00000412714 663 ntTSL 5 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 AC026884.1-201ENST00000418296 457 ntBASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 RN7SL838P-201ENST00000481676 295 ntBASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 ALDOAP1-201ENST00000491506 1078 ntBASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 AC140912.1-202ENST00000561802 194 ntTSL 3 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC20.74■□□□□ 0.91
ARHGEF40Q8TER5 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 SRP9P1-201ENST00000445874 261 ntBASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 SMIM28-201ENST00000573100 855 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 MYADML-201ENST00000474610 2147 ntBASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 HSD3BP1-201ENST00000286193 1111 ntBASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC20.73■□□□□ 0.91
ARHGEF40Q8TER5 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 AC011270.2-201ENST00000624293 2550 ntBASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 RFNG-202ENST00000429557 994 ntTSL 5 BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 CCNL2P1-201ENST00000512846 969 ntBASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC20.72■□□□□ 0.91
ARHGEF40Q8TER5 NAT9-204ENST00000578822 839 ntTSL 3 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms