Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
HIPK4Q8NE63 AL137783.1-201ENST00000623494 1896 ntBASIC14.27□□□□□ -0.13
HIPK4Q8NE63 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 SLC35F2-203ENST00000525071 3331 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 TUBB3P1-201ENST00000405796 1332 ntBASIC14.26□□□□□ -0.13
HIPK4Q8NE63 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 AC125807.1-201ENST00000483097 614 ntBASIC14.26□□□□□ -0.13
HIPK4Q8NE63 AC004066.1-201ENST00000502488 802 ntBASIC14.26□□□□□ -0.13
HIPK4Q8NE63 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 AC109322.1-201ENST00000524499 1264 ntBASIC14.26□□□□□ -0.13
HIPK4Q8NE63 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 AC072061.1-201ENST00000569710 2234 ntBASIC14.26□□□□□ -0.13
HIPK4Q8NE63 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HIPK4Q8NE63 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 AC087499.5-201ENST00000452760 1342 ntBASIC14.25□□□□□ -0.13
HIPK4Q8NE63 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 AC069120.2-201ENST00000524091 540 ntBASIC14.25□□□□□ -0.13
HIPK4Q8NE63 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 ZNF890P-202ENST00000530367 1156 ntBASIC14.25□□□□□ -0.13
HIPK4Q8NE63 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 TIMM17BP1-201ENST00000545713 516 ntBASIC14.25□□□□□ -0.13
HIPK4Q8NE63 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.25□□□□□ -0.13
HIPK4Q8NE63 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms