Protein–RNA interactions for Protein: Q8NBP0

TTC13, Tetratricopeptide repeat protein 13, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC13Q8NBP0 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TTC13Q8NBP0 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TTC13Q8NBP0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TTC13Q8NBP0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TTC13Q8NBP0 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TTC13Q8NBP0 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
TTC13Q8NBP0 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TTC13Q8NBP0 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
TTC13Q8NBP0 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TTC13Q8NBP0 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 ARSEP1-201ENST00000420443 635 ntBASIC15.2■□□□□ 0.02
TTC13Q8NBP0 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 AC011495.1-201ENST00000498085 584 ntBASIC15.2■□□□□ 0.02
TTC13Q8NBP0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 AC010319.3-201ENST00000597028 470 ntBASIC15.2■□□□□ 0.02
TTC13Q8NBP0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TTC13Q8NBP0 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 AP006294.1-201ENST00000415407 339 ntBASIC15.19■□□□□ 0.02
TTC13Q8NBP0 LINC01513-201ENST00000416930 483 ntTSL 2 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 AC027237.1-201ENST00000560942 655 ntBASIC15.19■□□□□ 0.02
TTC13Q8NBP0 AC106820.3-201ENST00000561653 397 ntBASIC15.19■□□□□ 0.02
TTC13Q8NBP0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TTC13Q8NBP0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms