Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 AC105206.1-202ENST00000314927 2368 ntBASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 RTN1-203ENST00000395090 1609 ntTSL 2 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 TOMM22P5-201ENST00000416399 439 ntBASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 AC004945.1-201ENST00000416738 983 ntBASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 AP005018.1-201ENST00000525475 301 ntBASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 API5-211ENST00000534695 560 ntTSL 5 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 AC092337.1-201ENST00000568699 1129 ntBASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 AC099568.2-201ENST00000609194 695 ntBASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
DEPDC4Q8N2C3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 RN7SL752P-201ENST00000463779 287 ntBASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 AC007431.3-201ENST00000623221 587 ntBASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.72□□□□□ -0.21
DEPDC4Q8N2C3 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms