Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PSAT1P2-201ENST00000426107 972 ntBASIC11.74□□□□□ -0.53
VPS13CQ709C8 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 AC078814.4-201ENST00000546650 327 ntBASIC11.74□□□□□ -0.53
VPS13CQ709C8 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 ADK-205ENST00000539909 1866 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 AL050341.2-201ENST00000567508 1541 ntBASIC11.74□□□□□ -0.53
VPS13CQ709C8 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 SAT1-201ENST00000379251 801 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 SAT1-202ENST00000379253 909 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 SAT1-203ENST00000379254 868 ntTSL 3 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 PHF23-213ENST00000613632 850 ntTSL 5 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 AC113385.2-201ENST00000614465 762 ntBASIC11.74□□□□□ -0.53
VPS13CQ709C8 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 AP000244.1-201ENST00000424582 201 ntBASIC11.74□□□□□ -0.53
VPS13CQ709C8 AC136604.1-202ENST00000425471 771 ntBASIC11.74□□□□□ -0.53
VPS13CQ709C8 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 AC090820.1-201ENST00000519722 591 ntBASIC11.74□□□□□ -0.53
VPS13CQ709C8 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 AC010478.1-203ENST00000558403 532 ntTSL 4 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 KRT8P34-201ENST00000577607 1044 ntBASIC11.74□□□□□ -0.53
VPS13CQ709C8 AL133467.4-201ENST00000602953 725 ntBASIC11.74□□□□□ -0.53
VPS13CQ709C8 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 AC138627.1-201ENST00000641127 1257 ntBASIC11.74□□□□□ -0.53
VPS13CQ709C8 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 SHMT1P1-201ENST00000419974 1312 ntBASIC11.74□□□□□ -0.53
VPS13CQ709C8 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC11.74□□□□□ -0.53
VPS13CQ709C8 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 MYADML-201ENST00000474610 2147 ntBASIC11.74□□□□□ -0.53
VPS13CQ709C8 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
VPS13CQ709C8 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 AC098657.1-201ENST00000416270 1135 ntBASIC11.73□□□□□ -0.53
VPS13CQ709C8 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 AC103563.1-201ENST00000429316 123 ntBASIC11.73□□□□□ -0.53
VPS13CQ709C8 EEF1DP2-201ENST00000433698 843 ntBASIC11.73□□□□□ -0.53
VPS13CQ709C8 AL136084.1-201ENST00000449172 318 ntBASIC11.73□□□□□ -0.53
VPS13CQ709C8 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
VPS13CQ709C8 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 SLC25A15P1-201ENST00000456738 342 ntBASIC11.73□□□□□ -0.53
VPS13CQ709C8 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 SLC25A15P3-201ENST00000505530 290 ntBASIC11.73□□□□□ -0.53
VPS13CQ709C8 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 OVOL3-201ENST00000585332 695 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 OVOL3-202ENST00000633214 675 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
VPS13CQ709C8 AC015909.5-201ENST00000624336 2266 ntBASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms