Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 AC136604.1-201ENST00000418535 575 ntBASIC12.86□□□□□ -0.35
C11orf88Q6PI97 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 MTND6P24-201ENST00000440466 518 ntBASIC12.86□□□□□ -0.35
C11orf88Q6PI97 GAPDHP21-201ENST00000450301 1010 ntBASIC12.86□□□□□ -0.35
C11orf88Q6PI97 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 TPT1P11-201ENST00000458482 498 ntBASIC12.86□□□□□ -0.35
C11orf88Q6PI97 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 BANF1P1-201ENST00000553684 263 ntBASIC12.86□□□□□ -0.35
C11orf88Q6PI97 HNRNPUP1-201ENST00000554987 333 ntBASIC12.86□□□□□ -0.35
C11orf88Q6PI97 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
C11orf88Q6PI97 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 NUTM2HP-201ENST00000442076 2498 ntBASIC12.85□□□□□ -0.35
C11orf88Q6PI97 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 ARAP3-207ENST00000626478 4928 ntTSL 5 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 CR383656.2-201ENST00000548656 2254 ntBASIC12.85□□□□□ -0.35
C11orf88Q6PI97 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 UGT1A2P-201ENST00000454886 866 ntBASIC12.85□□□□□ -0.35
C11orf88Q6PI97 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 AC097359.3-201ENST00000603982 1210 ntBASIC12.85□□□□□ -0.35
C11orf88Q6PI97 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 ABCA3-201ENST00000301732 6609 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.85□□□□□ -0.35
C11orf88Q6PI97 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms