Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 NKAIN1P1-201ENST00000435754 582 ntBASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 KRT8P13-201ENST00000463294 1010 ntBASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 AC132192.2-201ENST00000596206 1147 ntBASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 DGCR9-201ENST00000609630 2415 ntBASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RFWD3Q6PCD5 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 SERPINA13P-202ENST00000478994 924 ntBASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 AC008825.2-201ENST00000603374 718 ntBASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 AC022748.3-201ENST00000621828 275 ntBASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 AC027601.3-201ENST00000622907 509 ntBASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RFWD3Q6PCD5 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RFWD3Q6PCD5 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms