Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 PCDHB17P-202ENST00000623466 3066 ntBASIC13.78□□□□□ -0.2
LPCAT4Q643R3 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 AC091812.2-201ENST00000619081 385 ntBASIC13.78□□□□□ -0.2
LPCAT4Q643R3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 Z98257.2-202ENST00000641138 1548 ntBASIC13.78□□□□□ -0.2
LPCAT4Q643R3 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 AC009474.1-201ENST00000455096 1565 ntBASIC13.78□□□□□ -0.2
LPCAT4Q643R3 PAM-203ENST00000346918 3302 ntTSL 5 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 AC026271.4-201ENST00000578214 1833 ntBASIC13.78□□□□□ -0.2
LPCAT4Q643R3 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LPCAT4Q643R3 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LPCAT4Q643R3 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LPCAT4Q643R3 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LPCAT4Q643R3 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LPCAT4Q643R3 BX324167.2-201ENST00000623717 3316 ntBASIC13.77□□□□□ -0.2
LPCAT4Q643R3 CTDP1-202ENST00000299543 3380 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
LPCAT4Q643R3 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
LPCAT4Q643R3 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LPCAT4Q643R3 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
LPCAT4Q643R3 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 SALL4P5-201ENST00000419001 1760 ntBASIC13.77□□□□□ -0.21
LPCAT4Q643R3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 AL359845.1-201ENST00000458202 1648 ntBASIC13.77□□□□□ -0.21
LPCAT4Q643R3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 RN7SL828P-201ENST00000607615 303 ntBASIC13.77□□□□□ -0.21
LPCAT4Q643R3 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 AC026120.1-201ENST00000611536 926 ntBASIC13.77□□□□□ -0.21
LPCAT4Q643R3 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 AC092865.6-201ENST00000642101 219 ntBASIC13.77□□□□□ -0.21
LPCAT4Q643R3 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 DIDO1-204ENST00000370368 2704 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.77□□□□□ -0.21
LPCAT4Q643R3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LPCAT4Q643R3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.76□□□□□ -0.21
LPCAT4Q643R3 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LPCAT4Q643R3 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LPCAT4Q643R3 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LPCAT4Q643R3 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LPCAT4Q643R3 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LPCAT4Q643R3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms