Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
FAM78BQ5VT40 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
FAM78BQ5VT40 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
FAM78BQ5VT40 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 BEND3P3-201ENST00000611030 2440 ntBASIC11.68□□□□□ -0.54
FAM78BQ5VT40 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 RAD18-204ENST00000418463 563 ntTSL 4 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 RAD18-205ENST00000421052 582 ntTSL 3 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 URGCP-206ENST00000446958 365 ntTSL 2 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 AC067863.1-201ENST00000494933 530 ntBASIC11.68□□□□□ -0.54
FAM78BQ5VT40 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 AC027369.6-201ENST00000525520 931 ntBASIC11.68□□□□□ -0.54
FAM78BQ5VT40 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 AL138828.2-201ENST00000615812 383 ntBASIC11.68□□□□□ -0.54
FAM78BQ5VT40 AC139530.3-201ENST00000620344 690 ntBASIC11.68□□□□□ -0.54
FAM78BQ5VT40 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 USP47-202ENST00000339865 7775 ntTSL 2 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
FAM78BQ5VT40 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 AC068760.1-201ENST00000493579 1953 ntBASIC11.67□□□□□ -0.54
FAM78BQ5VT40 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 RN7SL618P-201ENST00000477850 296 ntBASIC11.67□□□□□ -0.54
FAM78BQ5VT40 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC11.67□□□□□ -0.54
FAM78BQ5VT40 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms