Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 PRR29-204ENST00000577953 565 ntTSL 4 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 AC015911.4-201ENST00000588022 1070 ntBASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 BRI3BPP1-201ENST00000594224 787 ntBASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 AP001002.3-201ENST00000623482 206 ntBASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 TSN-212ENST00000536142 3328 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 INTS4P2-202ENST00000614726 2019 ntBASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
LINC00242Q5T6M2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 BX842568.4-201ENST00000421222 227 ntBASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 TSSK5P-201ENST00000423978 907 ntBASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 AC134915.1-201ENST00000426461 574 ntBASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 AC241585.1-201ENST00000433527 519 ntBASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC10.01□□□□□ -0.81
LINC00242Q5T6M2 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms