Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC27Q2M243 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC27Q2M243 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC27Q2M243 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC27Q2M243 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC27Q2M243 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC27Q2M243 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC27Q2M243 AC011474.4-201ENST00000623523 2076 ntBASIC18.83■□□□□ 0.61
CCDC27Q2M243 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CCDC27Q2M243 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC27Q2M243 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC27Q2M243 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC27Q2M243 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC27Q2M243 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC27Q2M243 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC27Q2M243 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC27Q2M243 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC27Q2M243 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC27Q2M243 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC27Q2M243 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC27Q2M243 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CCDC27Q2M243 AC103592.1-201ENST00000394513 664 ntBASIC18.83■□□□□ 0.6
CCDC27Q2M243 GPAA1P2-201ENST00000417923 928 ntBASIC18.83■□□□□ 0.6
CCDC27Q2M243 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC27Q2M243 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC27Q2M243 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC27Q2M243 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC27Q2M243 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC27Q2M243 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC27Q2M243 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC27Q2M243 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC27Q2M243 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC27Q2M243 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC27Q2M243 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC27Q2M243 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC27Q2M243 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC27Q2M243 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC27Q2M243 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC27Q2M243 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC27Q2M243 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC27Q2M243 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC27Q2M243 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 SDCCAG3P2-201ENST00000326105 1023 ntBASIC18.82■□□□□ 0.6
CCDC27Q2M243 TSPY25P-201ENST00000429463 745 ntBASIC18.82■□□□□ 0.6
CCDC27Q2M243 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 MIR6799-201ENST00000620297 69 ntBASIC18.82■□□□□ 0.6
CCDC27Q2M243 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 MST1P2-201ENST00000457982 2291 ntBASIC18.82■□□□□ 0.6
CCDC27Q2M243 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 AC138028.6-201ENST00000616106 1482 ntBASIC18.82■□□□□ 0.6
CCDC27Q2M243 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 LINC01815-202ENST00000641468 1409 ntBASIC18.82■□□□□ 0.6
CCDC27Q2M243 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC27Q2M243 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC27Q2M243 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
CCDC27Q2M243 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 AC020907.1-201ENST00000616460 1350 ntBASIC18.81■□□□□ 0.6
CCDC27Q2M243 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC27Q2M243 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms