Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
COL10A1Q03692 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
COL10A1Q03692 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
COL10A1Q03692 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.39□□□□□ -0.43
COL10A1Q03692 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
COL10A1Q03692 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.39□□□□□ -0.43
COL10A1Q03692 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.39□□□□□ -0.43
COL10A1Q03692 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
COL10A1Q03692 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.39□□□□□ -0.43
COL10A1Q03692 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
COL10A1Q03692 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 AC004945.1-201ENST00000416738 983 ntBASIC12.39□□□□□ -0.43
COL10A1Q03692 CD8B2-202ENST00000417670 633 ntBASIC12.39□□□□□ -0.43
COL10A1Q03692 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
COL10A1Q03692 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.39□□□□□ -0.43
COL10A1Q03692 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.39□□□□□ -0.43
COL10A1Q03692 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.39□□□□□ -0.43
COL10A1Q03692 CROCCP4-201ENST00000457096 498 ntBASIC12.39□□□□□ -0.43
COL10A1Q03692 COX5BP1-201ENST00000507622 393 ntBASIC12.39□□□□□ -0.43
COL10A1Q03692 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.39□□□□□ -0.43
COL10A1Q03692 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.39□□□□□ -0.43
COL10A1Q03692 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC12.39□□□□□ -0.43
COL10A1Q03692 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.39□□□□□ -0.43
COL10A1Q03692 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.39□□□□□ -0.43
COL10A1Q03692 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
COL10A1Q03692 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 AC084346.2-201ENST00000607097 949 ntBASIC12.39□□□□□ -0.43
COL10A1Q03692 BX088702.1-201ENST00000610784 235 ntBASIC12.39□□□□□ -0.43
COL10A1Q03692 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.39□□□□□ -0.43
COL10A1Q03692 MIR6799-201ENST00000620297 69 ntBASIC12.39□□□□□ -0.43
COL10A1Q03692 PFAS-212ENST00000625942 396 ntTSL 5 BASIC12.39□□□□□ -0.43
COL10A1Q03692 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.39□□□□□ -0.43
COL10A1Q03692 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
COL10A1Q03692 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.39□□□□□ -0.43
COL10A1Q03692 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.39□□□□□ -0.43
COL10A1Q03692 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.39□□□□□ -0.43
COL10A1Q03692 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.39□□□□□ -0.43
COL10A1Q03692 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.39□□□□□ -0.43
COL10A1Q03692 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
COL10A1Q03692 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
COL10A1Q03692 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.39□□□□□ -0.43
COL10A1Q03692 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
COL10A1Q03692 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.38□□□□□ -0.43
COL10A1Q03692 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
COL10A1Q03692 AL928921.2-201ENST00000641325 2442 ntBASIC12.38□□□□□ -0.43
COL10A1Q03692 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.38□□□□□ -0.43
COL10A1Q03692 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.38□□□□□ -0.43
COL10A1Q03692 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.38□□□□□ -0.43
COL10A1Q03692 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
COL10A1Q03692 MIR1202-201ENST00000408529 83 ntBASIC12.38□□□□□ -0.43
COL10A1Q03692 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.38□□□□□ -0.43
COL10A1Q03692 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
COL10A1Q03692 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.38□□□□□ -0.43
COL10A1Q03692 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
COL10A1Q03692 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.38□□□□□ -0.43
COL10A1Q03692 AP003171.2-201ENST00000528208 925 ntBASIC12.38□□□□□ -0.43
COL10A1Q03692 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.38□□□□□ -0.43
COL10A1Q03692 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.38□□□□□ -0.43
COL10A1Q03692 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.38□□□□□ -0.43
COL10A1Q03692 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.38□□□□□ -0.43
COL10A1Q03692 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
COL10A1Q03692 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.38□□□□□ -0.43
COL10A1Q03692 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
COL10A1Q03692 AC002472.3-201ENST00000640124 621 ntBASIC12.38□□□□□ -0.43
COL10A1Q03692 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
COL10A1Q03692 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms