Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
IRX3P78415 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX3P78415 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
IRX3P78415 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX3P78415 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX3P78415 AP000356.3-201ENST00000382243 753 ntBASIC17.06■□□□□ 0.32
IRX3P78415 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX3P78415 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IRX3P78415 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IRX3P78415 AL592076.1-201ENST00000424448 303 ntBASIC17.06■□□□□ 0.32
IRX3P78415 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
IRX3P78415 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC17.06■□□□□ 0.32
IRX3P78415 AC131206.1-201ENST00000538078 1211 ntBASIC17.06■□□□□ 0.32
IRX3P78415 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
IRX3P78415 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.06■□□□□ 0.32
IRX3P78415 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
IRX3P78415 LINC01783-202ENST00000614408 828 ntBASIC17.06■□□□□ 0.32
IRX3P78415 BX284668.2-205ENST00000619677 828 ntBASIC17.06■□□□□ 0.32
IRX3P78415 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC17.06■□□□□ 0.32
IRX3P78415 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX3P78415 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.06■□□□□ 0.32
IRX3P78415 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX3P78415 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IRX3P78415 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC17.06■□□□□ 0.32
IRX3P78415 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC17.06■□□□□ 0.32
IRX3P78415 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.06■□□□□ 0.32
IRX3P78415 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX3P78415 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.06■□□□□ 0.32
IRX3P78415 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
IRX3P78415 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
IRX3P78415 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IRX3P78415 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
IRX3P78415 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.06■□□□□ 0.32
IRX3P78415 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX3P78415 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX3P78415 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX3P78415 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
IRX3P78415 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX3P78415 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 AL365203.3-201ENST00000609742 2057 ntBASIC17.05■□□□□ 0.32
IRX3P78415 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX3P78415 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.05■□□□□ 0.32
IRX3P78415 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.05■□□□□ 0.32
IRX3P78415 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX3P78415 RPSAP31-201ENST00000416648 895 ntBASIC17.05■□□□□ 0.32
IRX3P78415 RPS9P1-201ENST00000419943 583 ntBASIC17.05■□□□□ 0.32
IRX3P78415 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.05■□□□□ 0.32
IRX3P78415 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.05■□□□□ 0.32
IRX3P78415 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.05■□□□□ 0.32
IRX3P78415 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.05■□□□□ 0.32
IRX3P78415 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 AC087045.2-201ENST00000606279 1003 ntBASIC17.05■□□□□ 0.32
IRX3P78415 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.05■□□□□ 0.32
IRX3P78415 AC023024.2-201ENST00000623561 1993 ntBASIC17.05■□□□□ 0.32
IRX3P78415 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX3P78415 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
IRX3P78415 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 CYP4F23P-201ENST00000593402 1579 ntBASIC17.05■□□□□ 0.32
IRX3P78415 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
IRX3P78415 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
IRX3P78415 CNTNAP3P2-201ENST00000617175 3861 ntBASIC17.05■□□□□ 0.32
IRX3P78415 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.05■□□□□ 0.32
IRX3P78415 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.05■□□□□ 0.32
IRX3P78415 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
IRX3P78415 REXO1L2P-201ENST00000425429 2069 ntBASIC17.05■□□□□ 0.32
IRX3P78415 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
IRX3P78415 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
IRX3P78415 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
IRX3P78415 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX3P78415 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
IRX3P78415 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.04■□□□□ 0.32
IRX3P78415 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
IRX3P78415 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
IRX3P78415 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX3P78415 LBH-202ENST00000401506 485 ntTSL 3 BASIC17.04■□□□□ 0.32
IRX3P78415 AC135983.4-201ENST00000564116 1262 ntBASIC17.04■□□□□ 0.32
IRX3P78415 MIR3677-201ENST00000578964 60 ntBASIC17.04■□□□□ 0.32
IRX3P78415 MEG3_2.1-201ENST00000611456 105 ntBASIC17.04■□□□□ 0.32
IRX3P78415 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
IRX3P78415 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.04■□□□□ 0.32
IRX3P78415 AC007292.2-201ENST00000593524 1812 ntBASIC17.04■□□□□ 0.32
IRX3P78415 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.04■□□□□ 0.32
IRX3P78415 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.04■□□□□ 0.32
IRX3P78415 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 7.1 ms