Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
WNT3P56703 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
WNT3P56703 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
WNT3P56703 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.79□□□□□ -0.2
WNT3P56703 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.79□□□□□ -0.2
WNT3P56703 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.79□□□□□ -0.2
WNT3P56703 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 RPL7P3-201ENST00000441388 714 ntBASIC13.79□□□□□ -0.2
WNT3P56703 CSF2RBP1-201ENST00000447905 391 ntBASIC13.79□□□□□ -0.2
WNT3P56703 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
WNT3P56703 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.79□□□□□ -0.2
WNT3P56703 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.79□□□□□ -0.2
WNT3P56703 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.79□□□□□ -0.2
WNT3P56703 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.79□□□□□ -0.2
WNT3P56703 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC13.79□□□□□ -0.2
WNT3P56703 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.79□□□□□ -0.2
WNT3P56703 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
WNT3P56703 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.79□□□□□ -0.2
WNT3P56703 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 AC005586.2-201ENST00000563946 837 ntBASIC13.79□□□□□ -0.2
WNT3P56703 MIR4538-201ENST00000581377 78 ntBASIC13.79□□□□□ -0.2
WNT3P56703 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.79□□□□□ -0.2
WNT3P56703 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
WNT3P56703 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.79□□□□□ -0.2
WNT3P56703 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.79□□□□□ -0.2
WNT3P56703 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
WNT3P56703 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.79□□□□□ -0.2
WNT3P56703 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
WNT3P56703 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
WNT3P56703 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.79□□□□□ -0.2
WNT3P56703 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.79□□□□□ -0.2
WNT3P56703 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.79□□□□□ -0.2
WNT3P56703 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.79□□□□□ -0.2
WNT3P56703 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
WNT3P56703 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
WNT3P56703 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
WNT3P56703 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.78□□□□□ -0.2
WNT3P56703 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
WNT3P56703 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.78□□□□□ -0.2
WNT3P56703 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
WNT3P56703 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.78□□□□□ -0.2
WNT3P56703 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.78□□□□□ -0.2
WNT3P56703 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
WNT3P56703 AC072061.1-201ENST00000569710 2234 ntBASIC13.78□□□□□ -0.2
WNT3P56703 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
WNT3P56703 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
WNT3P56703 CD8B2-202ENST00000417670 633 ntBASIC13.78□□□□□ -0.2
WNT3P56703 AC026954.1-201ENST00000429771 1293 ntBASIC13.78□□□□□ -0.2
WNT3P56703 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC13.78□□□□□ -0.2
WNT3P56703 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.78□□□□□ -0.2
WNT3P56703 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.78□□□□□ -0.2
WNT3P56703 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.78□□□□□ -0.2
WNT3P56703 AC078819.1-201ENST00000547454 765 ntBASIC13.78□□□□□ -0.2
WNT3P56703 AC012085.1-201ENST00000548270 765 ntBASIC13.78□□□□□ -0.2
WNT3P56703 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
WNT3P56703 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.78□□□□□ -0.2
WNT3P56703 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
WNT3P56703 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.78□□□□□ -0.2
WNT3P56703 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.78□□□□□ -0.2
WNT3P56703 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.78□□□□□ -0.2
WNT3P56703 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
WNT3P56703 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
WNT3P56703 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.78□□□□□ -0.2
WNT3P56703 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.78□□□□□ -0.2
WNT3P56703 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
WNT3P56703 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms