Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC130709.1-201ENST00000484779 1212 ntBASIC15.16■□□□□ 0.02
EPHB3P54753 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC15.16■□□□□ 0.02
EPHB3P54753 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC15.16■□□□□ 0.02
EPHB3P54753 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.16■□□□□ 0.02
EPHB3P54753 MIR6727-201ENST00000620702 65 ntBASIC15.16■□□□□ 0.02
EPHB3P54753 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EPHB3P54753 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHB3P54753 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.16■□□□□ 0.02
EPHB3P54753 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHB3P54753 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.16■□□□□ 0.02
EPHB3P54753 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EPHB3P54753 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHB3P54753 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHB3P54753 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
EPHB3P54753 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHB3P54753 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.16■□□□□ 0.02
EPHB3P54753 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EPHB3P54753 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
EPHB3P54753 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
EPHB3P54753 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
EPHB3P54753 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
EPHB3P54753 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHB3P54753 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHB3P54753 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHB3P54753 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHB3P54753 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 LAP3P2-201ENST00000454686 1454 ntBASIC15.15■□□□□ 0.02
EPHB3P54753 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHB3P54753 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHB3P54753 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.15■□□□□ 0.02
EPHB3P54753 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
EPHB3P54753 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHB3P54753 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
EPHB3P54753 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 AC092580.1-201ENST00000433998 658 ntBASIC15.15■□□□□ 0.02
EPHB3P54753 AL627422.1-201ENST00000434104 580 ntBASIC15.15■□□□□ 0.02
EPHB3P54753 RPL7P35-201ENST00000446943 740 ntBASIC15.15■□□□□ 0.02
EPHB3P54753 LDHBP1-201ENST00000455730 1119 ntBASIC15.15■□□□□ 0.02
EPHB3P54753 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHB3P54753 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.15■□□□□ 0.02
EPHB3P54753 AC138894.2-201ENST00000602838 371 ntBASIC15.15■□□□□ 0.02
EPHB3P54753 AC087045.2-201ENST00000606279 1003 ntBASIC15.15■□□□□ 0.02
EPHB3P54753 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
EPHB3P54753 AC242376.2-201ENST00000619355 883 ntBASIC15.15■□□□□ 0.02
EPHB3P54753 AC011491.1-203ENST00000637688 543 ntBASIC15.15■□□□□ 0.02
EPHB3P54753 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.15■□□□□ 0.02
EPHB3P54753 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
EPHB3P54753 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
EPHB3P54753 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.15■□□□□ 0.02
EPHB3P54753 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.15■□□□□ 0.02
EPHB3P54753 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
EPHB3P54753 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
EPHB3P54753 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC15.15■□□□□ 0.02
EPHB3P54753 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.15■□□□□ 0.02
EPHB3P54753 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
EPHB3P54753 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.15■□□□□ 0.02
EPHB3P54753 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
EPHB3P54753 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
EPHB3P54753 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.02
EPHB3P54753 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHB3P54753 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHB3P54753 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHB3P54753 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
EPHB3P54753 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHB3P54753 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHB3P54753 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHB3P54753 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHB3P54753 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
EPHB3P54753 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.14■□□□□ 0.01
EPHB3P54753 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHB3P54753 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHB3P54753 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHB3P54753 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
EPHB3P54753 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHB3P54753 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHB3P54753 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC15.14■□□□□ 0.01
EPHB3P54753 AC079112.1-201ENST00000454972 939 ntBASIC15.14■□□□□ 0.01
EPHB3P54753 FTH1P22-201ENST00000456305 520 ntBASIC15.14■□□□□ 0.01
EPHB3P54753 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHB3P54753 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
EPHB3P54753 AP002803.1-201ENST00000528836 498 ntBASIC15.14■□□□□ 0.01
EPHB3P54753 RN7SL555P-201ENST00000584742 339 ntBASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms