Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PMS1P54277 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.03■□□□□ 0.16
PMS1P54277 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.03■□□□□ 0.16
PMS1P54277 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PMS1P54277 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PMS1P54277 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PMS1P54277 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
PMS1P54277 AHCYP2-201ENST00000430630 1300 ntBASIC16.03■□□□□ 0.16
PMS1P54277 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PMS1P54277 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 AL035633.1-201ENST00000406139 838 ntBASIC16.03■□□□□ 0.16
PMS1P54277 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PMS1P54277 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.03■□□□□ 0.16
PMS1P54277 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.03■□□□□ 0.16
PMS1P54277 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.03■□□□□ 0.16
PMS1P54277 AP006547.1-201ENST00000563435 692 ntBASIC16.03■□□□□ 0.16
PMS1P54277 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC16.03■□□□□ 0.16
PMS1P54277 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.03■□□□□ 0.16
PMS1P54277 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PMS1P54277 AC008825.2-201ENST00000603374 718 ntBASIC16.03■□□□□ 0.16
PMS1P54277 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.03■□□□□ 0.16
PMS1P54277 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 AL358472.5-202ENST00000641448 1267 ntBASIC16.03■□□□□ 0.16
PMS1P54277 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.03■□□□□ 0.16
PMS1P54277 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PMS1P54277 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PMS1P54277 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.03■□□□□ 0.16
PMS1P54277 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.03■□□□□ 0.16
PMS1P54277 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PMS1P54277 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.03■□□□□ 0.16
PMS1P54277 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC16.03■□□□□ 0.16
PMS1P54277 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PMS1P54277 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PMS1P54277 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.02■□□□□ 0.16
PMS1P54277 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PMS1P54277 AC072061.1-201ENST00000569710 2234 ntBASIC16.02■□□□□ 0.16
PMS1P54277 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PMS1P54277 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.02■□□□□ 0.16
PMS1P54277 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC16.02■□□□□ 0.16
PMS1P54277 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PMS1P54277 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.02■□□□□ 0.16
PMS1P54277 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC16.02■□□□□ 0.16
PMS1P54277 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.02■□□□□ 0.16
PMS1P54277 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.02■□□□□ 0.16
PMS1P54277 AL645933.1-201ENST00000440087 609 ntBASIC16.02■□□□□ 0.16
PMS1P54277 RPL7P3-201ENST00000441388 714 ntBASIC16.02■□□□□ 0.16
PMS1P54277 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC16.02■□□□□ 0.16
PMS1P54277 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.02■□□□□ 0.16
PMS1P54277 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.02■□□□□ 0.16
PMS1P54277 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.02■□□□□ 0.16
PMS1P54277 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 RHOXF1P1-202ENST00000635473 501 ntBASIC16.02■□□□□ 0.16
PMS1P54277 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PMS1P54277 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PMS1P54277 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PMS1P54277 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.02■□□□□ 0.15
PMS1P54277 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PMS1P54277 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PMS1P54277 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PMS1P54277 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.02■□□□□ 0.15
PMS1P54277 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.02■□□□□ 0.15
PMS1P54277 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
PMS1P54277 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms